Concepedia

The evolutionary landscape of colorectal tumorigenesis

William Cross, Michal Kováč, Ville Mustonen, Daniel Temko, Hayley L. Belnoue-Davis, Ann‐Marie Baker, Sujata Biswas, Roland Arnold, Laura Chegwidden, Chandler Gatenbee,

Nature Ecology & Evolution · 2018 · 154 citations · 38 references

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38

The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna, Matthew G. Hanna, Eric Banks et al. · Genome Research · 2010 · 30K citations · Full text

, , +17

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

Kai Wang, Man Li, Håkon Håkonarson · Nucleic Acids Research · 2010 · 15.6K citations · Full text

, , +17

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

Pablo Cingolani, Adrian E. Platts, Le Lily Wang et al. · Fly · 2012 · 12.7K citations · Full text

, , +17

APE: Analyses of Phylogenetics and Evolution in R language

Emmanuel Paradis, Julien Claude, Korbinian Strimmer · Bioinformatics · 2004 · 12.6K citations · Full text

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