Concepedia

Tellurium: An extensible python-based modeling environment for systems and synthetic biology

Kiri Choi, Kyle Medley, Matthias König, Kaylene Stocking, Lucian P. Smith, Stanley Gu, Herbert M. Sauro

Biosystems · 2018 · 187 citations · 21 references

DOI

Concepts

References

21

COBRApy: COnstraints-Based Reconstruction and Analysis for Python

Ali Ebrahim, Joshua A. Lerman, Bernhard Ø. Palsson et al. · BMC Systems Biology · 2013 · 1.5K citations · Full text

, , +13

The control of flux.

H. Kacser, Burns Ja · PubMed · 1973 · 1.5K citations

, , +8

Detection of multistability, bifurcations, and hysteresis in a large class of biological positive-feedback systems

David Angeli, James E. Ferrell, Eduardo D. Sontag · Proceedings of the National Academy of Sciences · 2004 · 1K citations · Full text

, , +13

Dynamic modeling of the central carbon metabolism of <i>Escherichia coli</i>

Christophe Chassagnole, Naruemol Noisommit‐Rizzi, Joachim Schmid et al. · Biotechnology and Bioengineering · 2002 · 558 citations

, , +17

LibSBML: an API Library for SBML

Benjamin Bornstein, Sarah Keating, Akiya Jouraku et al. · Bioinformatics · 2008 · 405 citations · Full text

, , +7