Science · 2018 · 395 citations · 47 references
Life SciencesBiochemistryPharmacologyCancer PharmacologyEnzymologyPlant BiochemistryAlkaloid BiosynthesisBiotransformation PathwaysPlant Natural Product BiosynthesisSecondary Metabolite BiosynthesisSecondary Metabolite ProductionAlkaloid Skeleton FormationAnticancer ChemotherapyBiosynthetic Intermediates In Alkaloid PathwaysEnzymatic Pathways In Alkaloid BiosynthesisPlant Alkaloids
(Madagascar periwinkle) in small quantities, and heterologous reconstitution of vinblastine biosynthesis could provide an additional source of this drug. However, the chemistry underlying vinblastine synthesis makes identification of the biosynthetic genes challenging. Here we identify the two missing enzymes necessary for vinblastine biosynthesis in this plant: an oxidase and a reductase that isomerize stemmadenine acetate into dihydroprecondylocarpine acetate, which is then deacetoxylated and cyclized to either catharanthine or tabersonine via two hydrolases characterized herein. The pathways show how plants create chemical diversity and also enable development of heterologous platforms for generation of stemmadenine-derived bioactive compounds.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar · Nucleic Acids Research · 2004 · 46.5K citations · Full text
Salmon provides fast and bias-aware quantification of transcript expression
Rob Patro, Geet Duggal, Michael I. Love et al. · Nature Methods · 2017 · 13.7K citations · Full text
The igraph software package for complex network research
Gábor Csárdi, Tamás Nepusz · Medical Entomology and Zoology · 2006 · 10.4K citations
Finding community structure in very large networks
Aaron Clauset, M. E. J. Newman, Cristopher Moore · Physical Review E · 2004 · 7.5K citations · Full text