Concepedia

The MaxQuant computational platform for mass spectrometry-based shotgun proteomics

Stefka Tyanova, Tikira Temu, Jüergen Cox

Nature Protocols · 2016 · 5.2K citations · 42 references

DOI

Concepts

References

42

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

Jürgen Cox, Matthias Mann · Nature Biotechnology · 2008 · 15.7K citations

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The Perseus computational platform for comprehensive analysis of (prote)omics data

Stefka Tyanova, Tikira Temu, Pavel Sinitcyn et al. · Nature Methods · 2016 · 8.9K citations

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Global quantification of mammalian gene expression control

Björn Schwanhäußer, Dorothea Busse, Na Li et al. · Nature · 2011 · 6.9K citations

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Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

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Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ

Jürgen Cox, Marco Y. Hein, Christian A. Luber et al. · Molecular & Cellular Proteomics · 2014 · 5.5K citations · Full text

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