American Journal of Epidemiology · 2017 · 218 citations · 98 references
Life SciencesBiostatisticsGeneticsEpidemiologyGenomicsMulti-omics IntegrationGene-environment InteractionGenomic EpidemiologyOmics IntegrationAnalytical Methods DevelopmentComplex Disease GeneticsEnvironmental Exposure AssessmentEnvironmental Exposure FactorsGene-environment AssociationsGene-environment Interaction ModelingGenotype-environment Interaction AnalysisNext-generation Sequencing Data Analysis
Recently, many new approaches, study designs, and statistical and analytical methods have emerged for studying gene-environment interactions (G×Es) in large-scale studies of human populations. There are opportunities in this field, particularly with respect to the incorporation of -omics and next-generation sequencing data and continual improvement in measures of environmental exposures implicated in complex disease outcomes. In a workshop called "Current Challenges and New Opportunities for Gene-Environment Interaction Studies of Complex Diseases," held October 17-18, 2014, by the National Institute of Environmental Health Sciences and the National Cancer Institute in conjunction with the annual American Society of Human Genetics meeting, participants explored new approaches and tools that have been developed in recent years for G×E discovery. This paper highlights current and critical issues and themes in G×E research that need additional consideration, including the improved data analytical methods, environmental exposure assessment, and incorporation of functional data and annotations.
98
A global reference for human genetic variation
Richard Durbin, Peter Donnelly, Paul Flicek et al. · Nature · 2015 · 20K citations · Full text
A New Initiative on Precision Medicine
Francis S. Collins, Harold Varmus · New England Journal of Medicine · 2015 · 5.2K citations · Full text
Systematic Localization of Common Disease-Associated Variation in Regulatory DNA
Matthew T. Maurano, Richard Humbert, Eric Rynes et al. · Science · 2012 · 4K citations · Full text
Mapping and analysis of chromatin state dynamics in nine human cell types
Jason Ernst, Pouya Kheradpour, Tarjei S. Mikkelsen et al. · Nature · 2011 · 3.1K citations