Concepedia

Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium

Rashmi Sinha, Galeb Abu-Ali, Emily Vogtmann, Anthony A. Fodor, Boyu Ren, Amnon Amir, Emma Schwager, Jonathan Crabtree, Siyuan Ma, Christian C. Abnet,

Nature Biotechnology · 2017 · 526 citations · 59 references

DOIFull text

Open access

Concepts

References

59

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 66.2K citations · Full text

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

Patrick D. Schloss, Sarah L. Westcott, Thomas Ryabin et al. · Applied and Environmental Microbiology · 2009 · 21.3K citations · Full text

UPARSE: highly accurate OTU sequences from microbial amplicon reads

R. C. Edgar · Nature Methods · 2013 · 16.7K citations

, , +5

FLASH: fast length adjustment of short reads to improve genome assemblies

Tanja Magoč, Steven L. Salzberg · Bioinformatics · 2011 · 15.1K citations · Full text

Structure, function and diversity of the healthy human microbiome

Curtis Huttenhower, Lucia Alvarado, Sandra L. Lee · Nature · 2012 · 11.6K citations · Full text

, , +7