Nature Communications · 2017 · 100 citations · 33 references
Life SciencesCell BiologyMolecular BiologyCell SignalingInflammationMolecular Cell BiologyCardiovascular Molecular PhysiologyG Protein-coupled Receptor SignalingInflammatory SignalingReceptor PhysiologyReceptor RegulationSingle-cell TranscriptomicsDifferentiationDifferentiation State AnalysisDifferentiation State HeterogeneityInflammatory ActivationMicrofluidic Single-cell AnalysisMurine ModelsReceptor Expression ProfilingSingle-cell Expression Signatures
G-protein-coupled receptor (GPCR) expression is extensively studied in bulk cDNA, but heterogeneity and functional patterning of GPCR expression in individual vascular cells is poorly understood. Here, we perform a microfluidic-based single-cell GPCR expression analysis in primary smooth muscle cells (SMC) and endothelial cells (EC). GPCR expression is highly heterogeneous in all cell types, which is confirmed in reporter mice, on the protein level and in human cells. Inflammatory activation in murine models of sepsis or atherosclerosis results in characteristic changes in the GPCR repertoire, and we identify functionally relevant subgroups of cells that are characterized by specific GPCR patterns. We further show that dedifferentiating SMC upregulate GPCRs such as Gpr39, Gprc5b, Gprc5c or Gpr124, and that selective targeting of Gprc5b modulates their differentiation state. Taken together, single-cell profiling identifies receptors expressed on pathologically relevant subpopulations and provides a basis for the development of new therapeutic strategies in vascular diseases.
33
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text
The Perseus computational platform for comprehensive analysis of (prote)omics data
Stefka Tyanova, Tikira Temu, Pavel Sinitcyn et al. · Nature Methods · 2016 · 8.9K citations
A global double‐fluorescent Cre reporter mouse
Mandar D. Muzumdar, Bosiljka Tasic, Kazunari Miyamichi et al. · genesis · 2007 · 3.7K citations · Full text
Single-cell messenger RNA sequencing reveals rare intestinal cell types
Dominic Grün, Anna Lyubimova, Lennart Kester et al. · Nature · 2015 · 1.3K citations