Angewandte Chemie International Edition · 2017 · 28 citations · 36 references
Life SciencesBiochemistryCell BiologyCellular MetabolismMass Spectrometric AnalysisMetabolismMass SpectrometryMass Spectrometry Data AnalysisMetabolic HeterogeneityMetabolic Pathway AnalysisMetabolic Pathway ElucidationMetabolism ModelingIsotope Pattern AnalysisIsotopomer AnalysisMass Spectral InterpretationMetabolite Distribution AnalysisNuclear Magnetic Resonance QuantificationNuclear Magnetic Resonance Spectroscopy Data AnalysisNuclear Magnetic Resonance Spectroscopy-based Metabolite ProfilingStable Isotope Ratios
Abstract Cellular metabolism in mammalian cells represents a challenge for analytical chemistry in the context of current biomedical research. Mass spectrometry and NMR spectroscopy together with computational tools have been used to study metabolism in cells. Compartmentalization of metabolism complicates the interpretation of stable isotope patterns in mammalian cells owing to the superimposition of different pathways contributing to the same pool of analytes. This indicates a need for a model‐free approach to interpret such data. Mass spectrometry and NMR spectroscopy provide complementary analytical information on metabolites. Herein an approach that simulates 13 C multiplets in NMR spectra and utilizes mass increments to obtain long‐range information is presented. The combined information is then utilized to derive isotopomer distributions. This is a first rigorous analytical and computational approach for a model‐free analysis of metabolic data applicable to mammalian cells.
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Metabolic Phenotyping in Health and Disease
Elaine Holmes, Ian D. Wilson, Jeremy K. Nicholson · Cell · 2008 · 820 citations · Full text