Scientific Reports · 2017 · 104 citations · 33 references
Life SciencesImmunologyMolecular BiologyGene ExpressionInflammationTranscriptomicsInflammatory Cell ResponsesInflammatory SignalingInnate Immune ResponseInnate Immune Signaling PathwaysMammalian ImmunologyTranscriptomics In FishDifferential SusceptibilityFish Immune ResponseImmune TranscriptomicsInflammation-related Gene ExpressionInflammatory Response GenesInnate Immunity GenomicsTranscriptomic ProfilesZebrafish Developmental Models
Zebrafish (Danio rerio), largely used as a model for studying developmental processes, has also emerged as a valuable system for modelling human inflammatory diseases. However, in a context where even mice have been questioned as a valid model for these analysis, a systematic study evaluating the reproducibility of human and mammalian inflammatory diseases in zebrafish is still lacking. In this report, we characterize the transcriptomic regulation to lipopolysaccharide in adult zebrafish kidney, liver, and muscle tissues using microarrays and demonstrate how the zebrafish genomic responses can effectively reproduce the mammalian inflammatory process induced by acute endotoxin stress. We provide evidence that immune signaling pathways and single gene expression is well conserved throughout evolution and that the zebrafish and mammal acute genomic responses after lipopolysaccharide stimulation are highly correlated despite the differential susceptibility between species to that compound. Therefore, we formally confirm that zebrafish inflammatory models are suited to study the basic mechanisms of inflammation in human inflammatory diseases, with great translational impact potential.
33
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
Daniele Merico, Ruth Isserlin, Oliver Stueker et al. · PLoS ONE · 2010 · 2.4K citations · Full text
The evolution of vertebrate Toll-like receptors
Jared C. Roach, Gustavo Glusman, Lee Rowen et al. · Proceedings of the National Academy of Sciences · 2005 · 1.2K citations · Full text