Concepedia

Clinical Validation of a Next-Generation Sequencing Genomic Oncology Panel via Cross-Platform Benchmarking against Established Amplicon Sequencing Assays

Sabah Kadri, Bradley Long, Ibro Mujacic, Chao Jie Zhen, Michelle N. Wurst, Shruti Sharma, Nadia A. McDonald, Nifang Niu, Sonia Benhamed, Jigyasa H. Tuteja,

Journal of Molecular Diagnostics · 2016 · 147 citations · 25 references

DOIFull text

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References

25

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony Bolger, Marc Lohse, Björn Usadel · Bioinformatics · 2014 · 69.7K citations · Full text

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The Sequence Alignment/Map format and SAMtools

Heng Li, Alec Wysoker, Tim Fennell et al. · Bioinformatics · 2009 · 67.5K citations · Full text

, , +17

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna, Matthew G. Hanna, Eric Banks et al. · Genome Research · 2010 · 30K citations · Full text

, , +17

An integrated map of genetic variation from 1,092 human genomes

Nature · 2012 · 8.2K citations · Full text

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Aligning sequence reads, clone sequences and assembly con*gs with BWA-MEM

Heng Li · arXiv (Cornell University) · 2014 · 5.8K citations · Full text

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