Applied Physics Letters · 2016 · 18 citations · 28 references
Natural SciencesChemistryComputational ChemistryMolecular PhysicsSurface ScienceAtomic Force MicroscopyIntermolecular ForcesIntermolecular InteractionsMolecular BondingMolecular InteractionsScanning Probe MicroscopyElectron DensityElectron-rich ComplexesHydrogen BondingHydrogen Bonding ModelsPseudopotentialsVan Der Waals Contacts
Experimental atomic force microscopy (AFM) studies have reported distinct features in regions with little electron density for various organic systems. These unexpected features have been proposed to be a direct visualization of intermolecular hydrogen bonding. Here, we apply a computational method using ab initio real-space pseudopotentials along with a scheme to account for tip tilting to simulate AFM images of the 8-hydroxyquinoline dimer and related systems to develop an understanding of the imaging mechanism for hydrogen bonds. We find that contrast for the observed “hydrogen bond” feature comes not from the electrostatic character of the bonds themselves but rather from repulsive tip tilting induced by neighboring electron-rich atoms.
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Generalized Gradient Approximation Made Simple
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