Genome Announcements · 2015 · 12 citations · 9 references
Comparative GenomicsGeneticsGenomicsHigh Throughput SequencingOrange Citrus TreeMolecular EcologySan GabrielDraft Genome SequenceStrain Sgca5Sequence AnalysisFunctional GenomicsBioinformaticsBiologyCitrus TreeGenome SequencingMicrobiologyReference GenomeMedicineGenome EditingSequence Assembly
The draft genome sequence of "Candidatus Liberibacter asiaticus" strain SGCA5 from an orange citrus tree in San Gabriel, California, is reported here. SGCA5 has a genome size of 1,201,445 bp, a G+C content of 36.4%, 1,152 predicted open reading frames (ORFs), and 42 RNA genes.
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Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 58.3K citations · Full text
Long-read Sequencing, Sequence Assembly, Natural Sciences +7
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Ramy K. Aziz, Daniela Bartels, Aaron A. Best et al. · BMC Genomics · 2008 · 11.5K citations · Full text
Wenbin Li, John S. Hartung, Laurène Lévy · Journal of Microbiological Methods · 2006 · 851 citations
Pathogen Detection, Foodborne Pathogens, Quantitative Real-time Pcr +7