Molecular Biology of the Cell · 2012 · 18 citations · 39 references
Life SciencesMolecular BiologyPhysiologyGene ExpressionSignal TransductionTranscriptional RegulationCellular Responses To HypoxiaHypoxia AdaptationTranscription Factors3' Untranslated Region RegulationHif-1 SignalingHypoxia-induced Gene ExpressionHypoxia-inducible Factor RegulationHypoxia-inducible Factor SignalingMonocyte-to-macrophage DifferentiationP38 Mitogen-activated Protein Kinase SignalingTranscriptional Responses To Hypoxia
Hypoxia-inducible factor-1 (HIF-1) is a well-studied transcription factor mediating cellular adaptation to hypoxia. It also plays a crucial role under normoxic conditions, such as in inflammation, where its regulation is less well understood. The 3'-untranslated region (UTR) of HIF-1α mRNA is among the most conserved UTRs in the genome, hinting toward posttranscriptional regulation. To identify potential trans factors, we analyzed a large compilation of expression data. In contrast to its known function of being a negative regulator, we found that tristetraprolin (TTP) positively correlates with HIF-1 target genes. Mathematical modeling predicts that an additional level of posttranslational regulation of TTP can explain the observed positive correlation between TTP and HIF-1 signaling. Mechanistic studies revealed that TTP indeed changes its mode of regulation from destabilizing to stabilizing HIF-1α mRNA upon phosphorylation by p38 mitogen-activated protein kinase (MAPK)/MAPK-activated protein kinase 2. Using a model of monocyte-to-macrophage differentiation, we show that TTP-driven HIF-1α mRNA stabilization is crucial for cell migration. This demonstrates the physiological importance of a hitherto-unknown mechanism for multilevel regulation of HIF-1α in normoxia.
39
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes
Adam Siepel, Gill Bejerano, Jakob Skou Pedersen et al. · Genome Research · 2005 · 4.3K citations · Full text
A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules
Joshua M. Stuart, Eran Segal, Daphne Koller et al. · Science · 2003 · 2.4K citations
HIF-1α Is Essential for Myeloid Cell-Mediated Inflammation
Thorsten Cramer, Yuji Yamanishi, Björn E. Clausen et al. · Cell · 2003 · 2K citations · Full text