BMC Genomics · 2009 · 59 citations · 61 references
Life SciencesPlant BiologyPlant SciencesPlant BiochemistryPlant Cell BiologyPlant Molecular BiologyGrapevine Gene ExpressionPhenylpropanoid MetabolismPlant Defense ResponsesPlant Hormone SignalingPlant Immune SignalingRipening PhysiologyCell Wall SofteningDefense-related Phenylpropanoid MetabolismGrape Abiotic Stress BiologyGrape Cell Suspension CulturesGrape Gene Expression AnalysisGrape TranscriptomicsResveratrol Biosynthesis In GrapeStilbene Biosynthesis
BACKGROUND: In response to pathogen attack, grapevine synthesizes phytoalexins belonging to the family of stilbenes. Grapevine cell cultures represent a good model system for studying the basic mechanisms of plant response to biotic and abiotic elicitors. Among these, modified beta-cyclodextrins seem to act as true elicitors inducing strong production of the stilbene resveratrol. RESULTS: The transcriptome changes of Vitis riparia x Vitis berlandieri grapevine cells in response to the modified beta-cyclodextrin, DIMEB, were analyzed 2 and 6 h after treatment using a suppression subtractive hybridization experiment and a microarray analysis respectively. At both time points, we identified a specific set of induced genes belonging to the general phenylpropanoid metabolism, including stilbenes and hydroxycinnamates, and to defence proteins such as PR proteins and chitinases. At 6 h we also observed a down-regulation of the genes involved in cell division and cell-wall loosening. CONCLUSIONS: We report the first large-scale study of the molecular effects of DIMEB, a resveratrol inducer, on grapevine cell cultures. This molecule seems to mimic a defence elicitor which enhances the physical barriers of the cell, stops cell division and induces phytoalexin synthesis.
61
In silico prediction of protein-protein interactions in human macrophages
Oussema Souiai, Fatma Z. Guerfali, Slimane Ben Miled et al. · BMC Research Notes · 2014 · 11K citations · Full text