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Comprehensive comparative analysis of strand-specific RNA sequencing methods

Joshua Z. Levin, Moran Yassour, Xian Adiconis, Chad Nusbaum, Dawn Thompson, Nir Friedman, Andreas Gnirke, Aviv Regev

Nature Methods · 2010 · 767 citations · 30 references

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References

30

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Cole Trapnell, Brian A. Williams, Geo Pertea et al. · Nature Biotechnology · 2010 · 16.5K citations

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

A Mortazavi, Brian A. Williams, Kenneth McCue et al. · Nature Methods · 2008 · 14.3K citations

, , +10

Alternative isoform regulation in human tissue transcriptomes

Eric T. Wang, Rickard Sandberg, Shujun Luo et al. · Nature · 2008 · 5.4K citations · Full text

, , +13

Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling

Nicholas T. Ingolia, Sina Ghaemmaghami, J. Robert Newman et al. · Science · 2009 · 4.1K citations · Full text

, , +17

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

Qun Pan, Ofer Shai, Leo J. Lee et al. · Nature Genetics · 2008 · 4K citations

, , +16