Gemma: a resource for the reuse, sharing and meta-analysis of expression profiling data

Gene Ontology: tool for the unification of biology

Michael Ashburner, Catherine A. Ball, Judith A. Blake et al. · Nature Genetics · 2000 · 43.3K citations · Full text

Functional Genomics, Engineering, Bioinformatics Database +11

Cytoscape: Software for Visualization and Analysis of Biological Networks

Michael Kohl, Sebastian Wiese, Bettina Warscheid · Methods in molecular biology · 2010 · 1.5K citations

NCBI GEO: mining tens of millions of expression profiles--database and tools update

Tanya Barrett, D. B. Troup, S. E. Wilhite et al. · Nucleic Acids Research · 2006 · 1.5K citations · Full text

Engineering, Genetics, Pattern Discovery +30

Disease Ontology: a backbone for disease semantic integration

Lynn M. Schriml, Cesar Arze, Suvarna Nadendla et al. · Nucleic Acids Research · 2011 · 953 citations · Full text

Ontology (Information Science), Ontology-based Data Integration, Health Informatics +15

Coexpression Analysis of Human Genes Across Many Microarray Data Sets

Homin K. Lee, Amy K Hsu, Jon Sajdak et al. · Genome Research · 2004 · 807 citations · Full text

Genetics, Coexpression Analysis, Transcriptomics Technology +19