INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2010 · 16 citations · 28 references
Life SciencesBiologyMicrobiologyBacteriologyComparative MicrobiologyMicrobial Taxonomy16S Ribosomal Ribonucleic Acid Analysis16S Ribosomal Ribonucleic Acid PhylogenyBacterial ClassificationComparative BacteriologyMicrobial PhylogeneticsPhylogenetic Classification16S Ribosomal Rna Gene Analysis16S Rrna Gene PhylogenyAquatic ActinobacteriaFatty AcidsFreshwater Microbial DiversityPolar LipidsSediment BacteriaType Strain Characterization
A novel bacterium, designated TRM 415(T), belonging to the genus Brevibacterium, was isolated from a sediment sample from a salt lake in Xinjiang province, China. Comparative 16S rRNA gene sequence analysis indicated that strain TRM 415(T) was phylogenetically most closely related to Brevibacterium album YIM 90718(T) (98.4 % sequence similarity) and had low similarity (<95.5 %) to other species of the genus Brevibacterium; however, DNA-DNA hybridization studies between strain TRM 415(T) and B. album YIM 90718(T) showed only 41.3 % relatedness. Strain TRM 415(T) possessed meso-diaminopimelic acid as the diagnostic cell-wall diamino acid, MK-8(H(2)) as the major menaquinone and polar lipids including phosphatidylglycerol and diphosphatidylglycerol. The major fatty acids were anteiso-C(17 : 0) and anteiso-C(15 : 0). The genomic DNA G+C content was 69 mol%. Based on the evidence from this polyphasic study, strain TRM 415(T) represents a novel species of the genus Brevibacterium, for which the name Brevibacterium salitolerans sp. nov. is proposed. The type strain is TRM 415(T) (=JCM 15900(T) =CCTCC AB 208328(T) =KCTC 19616(T)).
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CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP
Joseph Felsenstein · Evolution · 1985 · 41.5K citations · Full text