Analysis of HIV-1 pol sequences from Panama: Identification of phylogenetic clusters within subtype B and detection of antiretroviral drug resistance mutations☆

MRBAYES: Bayesian inference of phylogenetic trees

John P. Huelsenbeck, Fredrik Ronquist · Bioinformatics · 2001 · 22.2K citations · Full text

Life Sciences, Bioinformatics, Biology +14

BEAST: Bayesian evolutionary analysis by sampling trees

Alexei J. Drummond, Andrew Rambaut · BMC Evolutionary Biology · 2007 · 13.1K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +16

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

Sudhir Kumar · Briefings in Bioinformatics · 2004 · 11.8K citations · Full text

Life Sciences, Bioinformatics, Evolutionary Biology +16

Full-Length Human Immunodeficiency Virus Type 1 Genomes from Subtype C-Infected Seroconverters in India, with Evidence of Intersubtype Recombination

Kavita S. Lole, Robert C. Bollinger, Ramesh Paranjape et al. · Journal of Virology · 1999 · 2.8K citations · Full text

Life Sciences, Genetics, Molecular Genetics +11

Human Immunodeficiency Virus Reverse Transcriptase and Protease Sequence Database

Robert W. Shafer, Derek Stevenson, Bryan Chan · Nucleic Acids Research · 1999 · 932 citations

Life Sciences, Molecular Biology, Molecular Genetics +15