Bioinformatics · 1999 · 11 citations · 9 references
Life SciencesBiochemistryBioinformaticsProteomicsProteomics InformaticsSequence AnalysisProtein Database SearchProtein Sequence AnalysisProtein StructureSequence AlignmentSequence Similarity SearchDatabase SearchingMultiple Sequence AlignmentProtein Sequence AlignmentProtein Sequence Database ConstructionProtein Sequence SearchSequence Retrieval SystemsWeb Server Architecture
SUMMARY: We present a Web server where the SYSTERS cluster set of the non-redundant protein database consisting of sequences from SWISS-PROT and PIR is being made available for querying and browsing. The cluster set can be searched with a new sequence using the SSMAL search tool. Additionally, a multiple alignment is generated for each cluster and annotated with domain information from the Pfam protein family database. AVAILABILITY: The server address is http://www.dkfz-heidelberg.de/tbi/services/cluster/ systersform
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Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text
Basic Local Alignment Search Tool
Stephen F. Altschul · Journal of Molecular Biology · 1990 · 13.9K citations