Proteins Structure Function and Bioinformatics · 1995 · 198 citations · 24 references
Life SciencesBiochemistryBiophysicsEnzyme MechanismEnzymologyMolecular BiophysicsConformational ChangeConformational DynamicsProtein ConformationProtein DynamicsProtein StructureStructural EnzymologyCitrate SynthaseCollective MotionEnzyme Conformational DynamicsHinge MotionNormal Mode AnalysisNormal Mode TheoryNormal ModesProtein Dynamics Analysis
A normal mode analysis of the closed form of dimeric citrate synthase has been performed. The largest-amplitude collective motion predicted by this method compares well with the crystallographically observed hinge-bending motion. Such a result supports those obtained previously in the case of hinge-bending motions of smaller systems, such as lysozyme or hexokinase. Taken together, all these results suggest that low-frequency normal modes may become useful for determining a first approximation of the conformational path between the closed and open forms of these proteins.
24
The Symmetric Eigenvalue Problem.
J. H. Wilkinson, Beresford Ν. Parlett · Mathematics of Computation · 1981 · 1.2K citations