PLoS ONE · 2011 · 86 citations · 39 references
MedicineCancer BiologyOncologyCarcinogenesisMolecular OncologyOncogenesMelanocytic TumorsMicrorna BiologyMicrorna-mediated RegulationMolecular Tumor ProfilingNoncoding Rna In CancerTumor Suppressor GenesMalignant ProgressionMicrorna Function In CancerMicrorna In CancerMicrorna ProfilingMicrorna Regulation In CancerMicrorna Regulation Of DifferentiationMicrorna ScreeningMicrorna-mediated Oncogenesis
MicroRNAs (miRNAs) are small non-coding RNAs with regulatory roles, which are involved in a broad spectrum of physiological and pathological processes, including cancer. A common strategy for identification of miRNAs involved in cell transformation is to compare malignant cells to normal cells. Here we focus on identification of miRNAs that regulate the aggressive phenotype of melanoma cells. To avoid differences due to genetic background, a comparative high-throughput miRNA profiling was performed on two isogenic human melanoma cell lines that display major differences in their net proliferation, invasion and tube formation activities. This screening revealed two major cohorts of differentially expressed miRNAs. We speculated that miRNAs up-regulated in the more-aggressive cell line contribute oncogenic features, while the down-regulated miRNAs are tumor suppressive. This assumption was further tested experimentally on five candidate tumor suppressive miRNAs (miR-31, -34a, -184, -185 and -204) and on one candidate oncogenic miRNA (miR-17-5p), all of which have never been reported before in cutaneous melanoma. Remarkably, all candidate Suppressive-miRNAs inhibited net proliferation, invasion or tube formation, while miR-17-5p enhanced cell proliferation. miR-34a and miR-185 were further shown to inhibit the growth of melanoma xenografts when implanted in SCID-NOD mice. Finally, all six candidate miRNAs were detected in 15 different metastatic melanoma specimens, attesting for the physiological relevance of our findings. Collectively, these findings may prove instrumental for understanding mechanisms of disease and for development of novel therapeutic and staging technologies for melanoma.
39
Michael D. Abràmoff, Paulo Magalhães, Sunanda J. Ram · Data Archiving and Networked Services (DANS) · 2004 · 11.9K citations · Full text
Most mammalian mRNAs are conserved targets of microRNAs
Robin C. Friedman, Kyle Kai‐How Farh, Christopher B. Burge et al. · Genome Research · 2008 · 8.6K citations · Full text
miRBase: tools for microRNA genomics
Sam Griffiths‐Jones, Harpreet K. Saini, Stijn van Dongen et al. · Nucleic Acids Research · 2007 · 4.4K citations · Full text
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
Jing Chen, Eric E. Bardes, Bruce J. Aronow et al. · Nucleic Acids Research · 2009 · 3.1K citations · Full text