Genomic and phenotypic characterization of in vitro-generated Chlamydia trachomatis recombinants

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

Kazutaka Katoh · Nucleic Acids Research · 2002 · 17K citations · Full text

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

Daniel R. Zerbino, Ewan Birney · Genome Research · 2008 · 9.6K citations · Full text

Fitting a mixture model by expectation maximization to discover motifs in biopolymers.

Trisha L. Bailey, Charles Elkan · PubMed · 1994 · 5.1K citations

More Motifs, Engineering, Pattern Discovery +22

Mapping short DNA sequencing reads and calling variants using mapping quality scores

Heng Li, Jue Ruan, Richard Durbin · Genome Research · 2008 · 2.7K citations · Full text

Genome Sequence of an Obligate Intracellular Pathogen of Humans: <i>Chlamydia trachomatis</i>

Richard S. Stephens, Sue Kalman, C. J. Lammel et al. · Science · 1998 · 1.6K citations