Applied Microbiology and Biotechnology · 2012 · 72 citations · 42 references
Life SciencesBiochemistryMicrobiologyCarbohydrate BiochemistryEnzymologyMicrobial MetabolismGlycan BiosynthesisGlycan StructureGlycosylation PathwaysLactic Acid BacteriaMicrobial GlycobiologyCell Wall GlycosyltransferasesEnzymesGlycan HydrolasesGlycoside SynthesisGlycosidic LinkagesLinear Glycan ChainsOligosaccharide ProcessingSucrose Biosynthesis
Family 70 glycoside hydrolase glucansucrase enzymes exclusively occur in lactic acid bacteria and synthesize a wide range of α-D-glucan (abbreviated as α-glucan) oligo- and polysaccharides. Of the 47 characterized GH70 enzymes, 46 use sucrose as glucose donor. A single GH70 enzyme was recently found to be inactive with sucrose and to utilize maltooligosaccharides [(1→4)-α-D-glucooligosaccharides] as glucose donor substrates for α-glucan synthesis, acting as a 4,6-α-glucanotransferase (4,6-αGT) enzyme. Here, we report the characterization of two further GH70 4,6-αGT enzymes, i.e., from Lactobacillus reuteri strains DSM 20016 and ML1, which use maltooligosaccharides as glucose donor. Both enzymes cleave α1→4 glycosidic linkages and add the released glucose moieties one by one to the non-reducing end of growing linear α-glucan chains via α1→6 glycosidic linkages (α1→4 to α1→6 transfer activity). In this way, they convert pure maltooligosaccharide substrates into linear α-glucan product mixtures with about 50% α1→6 glycosidic bonds (isomalto/maltooligosaccharides). These new α-glucan products may provide an exciting type of carbohydrate for the food industry. The results show that 4,6-αGTs occur more widespread in family GH70 and can be considered as a GH70 subfamily. Sequence analysis allowed identification of amino acid residues in acceptor substrate binding subsites +1 and +2, differing between GH70 GTF and 4,6-αGT enzymes.
42
Clustal W and Clustal X version 2.0
Mark Larkin, Gordon Blackshields, Nigel P. Brown et al. · Bioinformatics · 2007 · 29.1K citations · Full text
Improved Prediction of Signal Peptides: SignalP 3.0
Jannick Dyrløv Bendtsen, Henrik Nielsen, Gunnar von Heijne et al. · Journal of Molecular Biology · 2004 · 6.4K citations
A simple and rapid method for the permethylation of carbohydrates
Ionel Ciucanu, F. Kerek · Carbohydrate Research · 1984 · 3.6K citations
A new bioinformatics analysis tools framework at EMBL-EBI
M. Goujon, Hamish McWilliam, Weizhong Li et al. · Nucleic Acids Research · 2010 · 1.9K citations · Full text