Concepedia

Comparative genomics of prevaccination and modern Bordetella pertussis strains

Marieke J Bart, Marjolein van Gent, Han GJ van der Heide, Jos Boekhorst, Peter W. M. Hermans, Julian Parkhill, Frits R. Mooi

BMC Genomics · 2010 · 93 citations · 50 references

DOIFull text

Open access

Abstract

Our work suggests that B. pertussis adapted by successive accumulation of SNPs and by gene (in)activation. In particular changes in gene regulation may have played a role in adaptation.

References

50

Statistical methods for detecting molecular adaptation

Ziheng Yang, Joseph P. Bielawski · Trends in Ecology & Evolution · 2000 · 1.8K citations · Full text

Accuracy and quality of massively parallel DNA pyrosequencing

Susan M. Huse, Julie A. Huber, Hilary G. Morrison et al. · Genome biology · 2007 · 1.3K citations · Full text

Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

Julian Parkhill, Mohammed Sebaihia, Andrew Preston et al. · Nature Genetics · 2003 · 1K citations

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Estimating Maximum Likelihood Phylogenies with PhyML

Stéphane Guindon, Frédéric Delsuc, Jean-François Dufayard et al. · Methods in molecular biology · 2009 · 835 citations · Full text

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

Kathryn E. Holt, Julian Parkhill, Camila J. Mazzoni et al. · Nature Genetics · 2008 · 503 citations · Full text

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