Concepedia

Deleted copy number variation of Hanwoo and Holstein using next generation sequencing at the population level

Donghyun Shin, Hyun Jeong Lee, Seoae Cho, Hyeon Jeong Kim, Jae Yeon Hwang, Chang‐Kyu Lee, Jin-Young Jeong, Duhak Yoon, Heebal Kim

BMC Genomics · 2014 · 55 citations · 87 references

DOIFull text

Open access

Abstract

This study provides useful information for assessing the impact of CNVs on cattle traits using NGS at the population level.

References

87

Fast gapped-read alignment with Bowtie 2

Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 58.3K citations · Full text

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang, Brad T. Sherman, Richard A. Lempicki · Nature Protocols · 2008 · 36.7K citations

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Inference of Population Structure Using Multilocus Genotype Data

Jonathan K. Pritchard, Matthew Stephens, Peter Donnelly · Genetics · 2000 · 33.7K citations · Full text

MrBayes 3: Bayesian phylogenetic inference under mixed models

Fredrik Ronquist, John P. Huelsenbeck · Bioinformatics · 2003 · 29.1K citations · Full text

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna, Matthew G. Hanna, Eric Banks et al. · Genome Research · 2010 · 28.9K citations · Full text