Analyzing and enhancing mRNA translational efficiency in an Escherichia coli in vitro expression system

The codon adaptation index-a measure of directional synonymous codon usage bias, and its potential applications

Paul M. Sharp, Wen‐Hsiung Li · Nucleic Acids Research · 1987 · 4.1K citations · Full text

Life Sciences, Genetics, Molecular Genetics +15

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

David H. Mathews, Jeffrey Sabina, Michael Zuker et al. · Journal of Molecular Biology · 1999 · 3.9K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +15

The 3′-Terminal Sequence of <i>Escherichia coli</i> 16S Ribosomal RNA: Complementarity to Nonsense Triplets and Ribosome Binding Sites

John Shine, L. Dalgarno · Proceedings of the National Academy of Sciences · 1974 · 3.6K citations · Full text

Life Sciences, Microbiology, Molecular Biology +14

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

Michael Zuker, Patrick Stiegler · Nucleic Acids Research · 1981 · 3.6K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +17

Vienna RNA secondary structure server

Ivo L. Hofacker · Nucleic Acids Research · 2003 · 2.4K citations · Full text

Life Sciences, Bioinformatics, Molecular Biology +15