Journal of Bacteriology · 2012 · 22 citations · 10 references
GeneticsGenomicsSequence AlignmentMicrobial EcologyEnvironmental MicrobiologyNod GenesDraft SequenceDraft Genome SequenceSequence AnalysisBiological Nitrogen FixationMolecular MicrobiologyBioinformaticsBiologyNatural SciencesGenome SequencingMicrobiologyReference GenomeMedicineMicrobial Genetics
The draft sequence of the genome of Bradyrhizobium elkanii 587 is presented. This was obtained using Illumina Next-Gen DNA sequencing combined with Sanger sequencing. Genes for the pathways involved in biological nitrogen fixation (the nif gene cluster), nod genes including nodABC, and genes for the type III protein secretion system (T3SS) are present.
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The RAST Server: Rapid Annotations using Subsystems Technology
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Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
Daniel R. Zerbino, Ewan Birney · Genome Research · 2008 · 9.6K citations · Full text