Concepedia

Codon usage patterns and adaptive evolution of marine unicellular cyanobacteria Synechococcus and Prochlorococcus

Tonghai Yu, Jinsong Li, Yang Yang, Qi Liu, Biaobang Chen, Fangqing Zhao, Qiyu Bao, Jinyu Wu

Molecular Phylogenetics and Evolution · 2011 · 44 citations · 38 references

DOI

Concepts

References

38

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

Julie Thompson, Desmond G. Higgins, Toby J. Gibson · Nucleic Acids Research · 1994 · 64.9K citations · Full text

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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

Koichiro Tamura, Joel T. Dudley, M Nei et al. · Molecular Biology and Evolution · 2007 · 28.8K citations · Full text

, , +17

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

Stéphane Guindon, Olivier Gascuel · Systematic Biology · 2003 · 17K citations · Full text

, , +17

EMBOSS: The European Molecular Biology Open Software Suite

Peter Rice, Ian Longden, Alan J. Bleasby · Trends in Genetics · 2000 · 9.9K citations

, , +4

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

Li Li, Christian J. Stoeckert, David S. Roos · Genome Research · 2003 · 6.1K citations · Full text

, , +16