The Journal of Immunology · 2015 · 36 citations · 45 references
Life SciencesImmunologyMolecular BiologyCell DifferentiationGene ExpressionProteomicsGene Expression RegulationRegulatory T CellsT Cell BiologyT Cell DevelopmentT Cell DifferentiationThymic DevelopmentComparative Data AnalysisConventional CellsProteome AnnotationProteome BioinformaticsThymic Regulatory T Cell DevelopmentThymic Regulatory T CellsThymic T Cell DevelopmentTranscriptional Regulation Of T Cell Differentiation
Regulatory T cells (Tregs) differentiate in the thymus, but the mechanisms that control this process are not fully understood. We generated a comprehensive quantitative and differential proteome of murine Tregs and conventional T cells. We identified 5225 proteins, 164 of which were differentially expressed in Tregs. Together with the comparative analysis of proteome and gene expression data, we identified TCF7 as a promising candidate. Genetic elimination of transcription factor 7 (TCF7) led to increased fractions of Tregs in the thymus. Reduced levels of TCF7, found in the heterozygote, resulted in a greater potential for Treg precursors to differentiate into the Treg lineage. In contrast, activation of TCF7 through β-catenin had the opposite effect. TCF7 levels influenced the required TCR signaling strength of Treg precursors, and TCF7 deficiency broadened the repertoire and allowed lower TCR affinities to be recruited into the Treg lineage. FOXP3 was able to repress TCF7 protein expression. In summary, we propose a regulatory role for TCF7 in limiting access to the Treg lineage.
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Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
Paul Shannon, Andrew Markiel, Owen Ozier et al. · Genome Research · 2003 · 54.3K citations · Full text