Concepedia

Transposon Content Analysis

Transposon Content Analysis is a methodological framework within comparative gene content analysis that specifically quantifies and characterizes the abundance, distribution, and evolutionary dynamics of transposable elements across genomes to infer functional and structural genomic differences.

65

Publications

4K

Citations

417

Authors

155

Institutions

Publications per year

2017–2026

20

Parents

Publications

65

Comparative Analysis of Transposable Elements Highlights Mobilome Diversity and Evolution in Vertebrates

Domitille Chalopin, Magali Naville, Floriane Plard et al. · Genome Biology and Evolution · 2015 · 412 citations · Full text

, , +17

Transposable Elements versus the Fungal Genome: Impact on Whole-Genome Architecture and Transcriptional Profiles

Raúl Castanera, Leticia López-Varas, Alessandra Borgognone et al. · PLoS Genetics · 2016 · 225 citations · Full text

, , +17

LTR Retrotransposons Contribute to Genomic Gigantism in Plethodontid Salamanders

Cheng Sun, Donald B. Shepard, Rebecca A. Chong et al. · Genome Biology and Evolution · 2011 · 203 citations · Full text

, , +14

Genome Size and Transposable Element Content as Determined by High-Throughput Sequencing in Maize and Zea luxurians

Maud I. Tenaillon, Matthew B. Hufford, Brandon S. Gaut et al. · Genome Biology and Evolution · 2011 · 183 citations · Full text

, , +17

TIR-Learner, a New Ensemble Method for TIR Transposable Element Annotation, Provides Evidence for Abundant New Transposable Elements in the Maize Genome

Weijia Su, Xun Gu, Thomas Peterson · Molecular Plant · 2019 · 173 citations · Full text

, , +15

1–5 of 65

Authors

417

  1. DA
    David A. Ray

    Texas Tech University, United States

    5 publications · 397 citations

    4

    h-index

  2. CF
    Cédric Feschotte

    Cornell University, United States

    3 publications · 295 citations

    3

    h-index

  3. JR
    Jeffrey Ross‐Ibarra

    University of California, Davis, United States

    3 publications · 322 citations

    3

    h-index

  4. MI
    Masanobu Itoh

    Kyoto Institute of Technology, Japan

    3 publications · 55 citations

    3

    h-index

  5. NJ
    Ning Jiang

    Michigan State University, United States

    3 publications · 270 citations

    3

    h-index

1–5 of 417

Institutions

155

  1. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    10 publications

    768 citations

  2. University of Georgia

    Athens, United States

    5 h-index

    17 publications

    1.2K citations

  3. Université Claude Bernard Lyon 1

    Villeurbanne, France

    4 h-index

    11 publications

    2.5K citations

  4. Laboratoire de Biométrie et Biologie Evolutive

    Villeurbanne, France

    4 h-index

    7 publications

    826 citations

  5. University of California, Davis

    Davis, United States

    4 h-index

    9 publications

    686 citations

  6. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    3 publications

    197 citations

  7. Kyoto Institute of Technology

    Kyoto, Japan

    3 h-index

    5 publications

    79 citations

  8. Carnegie Department of Plant Biology

    Stanford, United States

    3 h-index

    5 publications

    343 citations

1–8 of 155

Venues

  1. BMC Genomics

    5 publications · 177 citations

    5

    h-index

  2. Mobile DNA

    4 publications · 151 citations

    4

    h-index

  3. The Plant Journal

    4 publications · 384 citations

    4

    h-index

  4. Molecular Biology and Evolution

    MBE · 4 publications · 235 citations

    4

    h-index

  5. Genome Biology and Evolution

    GBE · 4 publications · 837 citations

    4

    h-index

1–5