Concepedia

Template-based Modeling Benchmarks

Template-Based Modeling Benchmarks is a standardized evaluation framework that assesses the performance and generalization of template-based modeling approaches by measuring their accuracy, consistency, and efficiency in reconstructing or predicting target structures using predefined structural templates.

9

Publications

800

Citations

42

Authors

17

Institutions

Publications per year

2017–2026

1

Parents

Publications

9

Improving protein fold recognition and template-based modeling by employing probabilistic-based matching between predicted one-dimensional structural properties of query and corresponding native properties of templates

Yuedong Yang, Eshel Faraggi, Huiying Zhao et al. · Bioinformatics · 2011 · 334 citations

, , +17

Developing an engineering shape benchmark for CAD models

Subramaniam Jayanti, Yagnanarayanan Kalyanaraman, Natraj Iyer et al. · Computer-Aided Design · 2006 · 291 citations

, , +11

Template-Based Modeling of Protein-RNA Interactions

Jinfang Zheng, Petras J. Kundrotas, Ilya A. Vakser et al. · PLoS Computational Biology · 2016 · 47 citations · Full text

, , +17

Assessment of template‐based modeling of protein structure in CASP11

Vivek Modi, Qifang Xu, Sam Adhikari et al. · Proteins Structure Function and Bioinformatics · 2016 · 34 citations · Full text

, , +14

Improved computational epitope profiling using structural models identifies a broader diversity of antibodies that bind to the same epitope

Fabian C. Spoendlin, Brennan Abanades, Matthew I. J. Raybould et al. · Frontiers in Molecular Biosciences · 2023 · 27 citations · Full text

, , +15

1–5 of 9

Authors

42

  1. VM
    Vivek Modi

    Fox Chase Cancer Center, United States

    1 publications · 34 citations

    1

    h-index

  2. BA
    Brennan Abanades

    University of Oxford, United Kingdom

    1 publications · 27 citations

    1

    h-index

  3. FC
    Fabian C. Spoendlin

    University of Oxford, United Kingdom

    1 publications · 27 citations

    1

    h-index

  4. JR
    Jaques Reifman

    United States Army Medical Research and Development Command, United States

    1 publications · 15 citations

    1

    h-index

  5. MS
    Miwa Sato

    Okayama University, Japan

    1 publications · 11 citations

    1

    h-index

1–5 of 42

Institutions

17

  1. Utrecht University

    Utrecht, The Netherlands

    1 h-index

    5 publications

    125 citations

  2. DEVCOM Army Research Laboratory

    Adelphi, United States

    1 h-index

    1 publications

    15 citations

  3. United States Army Medical Research Institute of Infectious Diseases

    Frederick, United States

    1 h-index

    1 publications

    15 citations

  4. National Institute of Advanced Industrial Science and Technology

    Tsukuba, Japan

    1 h-index

    2 publications

    22 citations

  5. Purdue University West Lafayette

    West Lafayette, United States

    1 h-index

    4 publications

    1.2K citations

  6. Yokohama City University

    Yokohama, Japan

    1 h-index

    1 publications

    11 citations

  7. East China University of Science and Technology

    Shanghai, China

    1 h-index

    6 publications

    96 citations

  8. United States Army Medical Research and Development Command

    Frederick, United States

    1 h-index

    7 publications

    105 citations

1–8 of 17

Venues

  1. Briefings in Bioinformatics

    1 publications · 25 citations

    1

    h-index

  2. 1

    h-index

  3. PLoS ONE

    1 publications · 15 citations

    1

    h-index

  4. Frontiers in Molecular Biosciences

    1 publications · 27 citations

    1

    h-index

  5. Computer-Aided Design

    1 publications · 291 citations

    1

    h-index

1–5