Concepedia

Template-based Loop Modeling

Template-Based Loop Modeling is a loop modeling approach that belongs to the class of knowledge-based methods, distinguished by its reliance on empirically determined structural templates from known protein conformations to reconstruct missing loop regions in three-dimensional protein structures.

12

Publications

2K

Citations

52

Authors

26

Institutions

Publications per year

2017–2026

2

Variants

Comparative Loop Modeling

Parents

Publications

12

GalaxyWEB server for protein structure prediction and refinement

Jin Hwan Ko, Hahnbeom Park, Lim Heo et al. · Nucleic Acids Research · 2012 · 1K citations · Full text

, , +17

Developing a Fully Glycosylated Full-Length SARS-CoV-2 Spike Protein Model in a Viral Membrane

Hyeonuk Woo, Sang‐Jun Park, Yeol Kyo Choi et al. · The Journal of Physical Chemistry B · 2020 · 291 citations · Full text

, , +17

ArchPRED: a template based loop structure prediction server

Narcís Fernández‐Fuentes, Jixian Zhai, András Fiser · Nucleic Acids Research · 2006 · 185 citations · Full text

, , +14

Effective protein model structure refinement by loop modeling and overall relaxation

Gyu Rie Lee, Lim Heo, Chaok Seok · Proteins Structure Function and Bioinformatics · 2015 · 139 citations · Full text

, , +16

GalaxyTBM: template-based modeling by building a reliable core and refining unreliable local regions

Junsu Ko, Hahnbeom Park, Chaok Seok · BMC Bioinformatics · 2012 · 114 citations · Full text

, , +17

1–5 of 12

Authors

52

  1. CS
    Chaok Seok

    Seoul National University, South Korea

    5 publications · 1.6K citations

    5

    h-index

  2. HP
    Hahnbeom Park

    University of Washington, United States

    3 publications · 1.2K citations

    3

    h-index

  3. LH
    Lim Heo

    Seoul National University, South Korea

    2 publications · 1.1K citations

    2

    h-index

  4. JL
    Jumin Lee

    Lehigh University, United States

    1 publications · 291 citations

    1

    h-index

  5. PT
    Pierre Tufféry

    Université Paris Cité, France

    1 publications · 39 citations

    1

    h-index

1–5 of 52

Institutions

26

  1. Seoul National University

    Seoul, South Korea

    5 h-index

    15 publications

    5.8K citations

  2. Korea Institute for Advanced Study

    Seoul, South Korea

    2 h-index

    12 publications

    720 citations

  3. Sapienza University of Rome

    Rome, Italy

    1 h-index

    3 publications

    93 citations

  4. Lehigh University

    Bethlehem, United States

    1 h-index

    7 publications

    2K citations

  5. University of Cambridge

    Cambridge, United Kingdom

    1 h-index

    1 publications

    291 citations

  6. Inserm

    Paris, France

    1 h-index

    4 publications

    156 citations

  7. Macquarie University

    Sydney, Australia

    1 h-index

    3 publications

    36 citations

  8. University of Suwon

    Hwaseong-si, South Korea

    1 h-index

    3 publications

    117 citations

1–8 of 26

Venues

  1. Proteins Structure Function and Bioinformatics

    4 publications · 312 citations

    4

    h-index

  2. Nucleic Acids Research

    2 publications · 1.2K citations

    2

    h-index

  3. Bioinformatics

    2 publications · 43 citations

    2

    h-index

  4. Scientific Reports

    1 publications · 39 citations

    1

    h-index

  5. The Journal of Physical Chemistry B

    1 publications · 291 citations

    1

    h-index

1–5