Concepedia

Tandem Repeat Assembly

Tandem Repeat Assembly is a computational method in genomics that specifically reconstructs contiguous sequences from repetitive genomic regions characterized by adjacent, sequential repetitions of DNA motifs, thereby resolving structural ambiguities that arise during genome assembly due to high sequence similarity within tandem repeats.

46

Publications

2.6K

Citations

386

Authors

110

Institutions

Publications per year

2017–2026

21

Parents

Publications

46

StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps

Mitchell R. Vollger, Peter Kerpedjiev, Adam M. Phillippy et al. · Bioinformatics · 2022 · 186 citations · Full text

, , +17

An improved genome assembly uncovers prolific tandem repeats in Atlantic cod

Ole K. Tørresen, Bastiaan Star, Sissel Jentoft et al. · BMC Genomics · 2017 · 170 citations · Full text

, , +14

Recompleting the <i>Caenorhabditis elegans</i> genome

Jun Yoshimura, Kazuki Ichikawa, Massa J. Shoura et al. · Genome Research · 2019 · 169 citations · Full text

, , +17

Human-specific tandem repeat expansion and differential gene expression during primate evolution

Arvis Sulovari, Ruiyang Li, Peter A. Audano et al. · Proceedings of the National Academy of Sciences · 2019 · 158 citations · Full text

, , +17

Gapless assembly of maize chromosomes using long-read technologies

Jianing Liu, Arun S. Seetharam, Kapeel Chougule et al. · Genome biology · 2020 · 144 citations · Full text

, , +17

1–5 of 46

Authors

386

  1. MR
    Mitchell R. Vollger

    University of Washington, United States

    3 publications · 354 citations

    3

    h-index

  2. EE
    Evan E. Eichler

    University of Washington, United States

    4 publications · 512 citations

    3

    h-index

  3. RK
    R. Kelly Dawe

    University of Georgia, United States

    3 publications · 217 citations

    3

    h-index

  4. KH
    Karen H. Miga

    University of California, Santa Cruz, United States

    2 publications · 190 citations

    2

    h-index

  5. NK
    Natalay Kouprina

    National Cancer Institute, United States

    2 publications · 71 citations

    2

    h-index

1–5 of 386

Institutions

110

  1. National Institutes of Health

    Bethesda, United States

    4 h-index

    6 publications

    414 citations

  2. University of Georgia

    Athens, United States

    4 h-index

    15 publications

    1K citations

  3. National Human Genome Research Institute

    Bethesda, United States

    3 h-index

    3 publications

    366 citations

  4. University of Washington

    Seattle, United States

    3 h-index

    16 publications

    2.3K citations

  5. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    4 publications

    512 citations

  6. University of California San Diego

    San Diego, United States

    2 h-index

    4 publications

    250 citations

  7. St Petersburg University

    Saint Petersburg, Russia

    2 h-index

    3 publications

    194 citations

  8. University of California, Los Angeles

    Los Angeles, United States

    2 h-index

    10 publications

    548 citations

1–8 of 110

Venues

  1. Bioinformatics

    5 publications · 506 citations

    5

    h-index

  2. Nucleic Acids Research

    4 publications · 157 citations

    4

    h-index

  3. Proceedings of the National Academy of Sciences

    PNAS · 3 publications · 263 citations

    3

    h-index

  4. Genome Research

    GR · 3 publications · 288 citations

    3

    h-index

  5. Molecular and General Genetics MGG

    2 publications · 86 citations

    2

    h-index

1–5