Concepedia

Structural Variant-aware Assembly

Structural Variant-Aware Assembly is a diploid genome assembly approach that explicitly identifies and incorporates structural variants during the reconstruction process to accurately resolve allele-specific genomic architectures.

11

Publications

1.4K

Citations

94

Authors

44

Institutions

Publications per year

2017–2026

6

Parents

Publications

11

Genome mapping on nanochannel arrays for structural variation analysis and sequence assembly

Ernest T. Lam, Alex Hastie, Chin Jia Lin et al. · Nature Biotechnology · 2012 · 686 citations · Full text

, , +13

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

Bernardo Clavijo, Luca Venturini, Christian Schudoma et al. · Genome Research · 2017 · 439 citations · Full text

, , +17

A graph-based approach to diploid genome assembly

Shilpa Garg, Mikko Rautiainen, Adam M. Novak et al. · Bioinformatics · 2018 · 80 citations · Full text

, , +17

HySA: a Hybrid Structural variant Assembly approach using next-generation and single-molecule sequencing technologies

Xian Fan, Mark Chaisson, Luay Nakhleh et al. · Genome Research · 2017 · 65 citations · Full text

, , +17

A beginner’s guide to assembling a draft genome and analyzing structural variants with long-read sequencing technologies

Jun Kim, Chuna Kim · STAR Protocols · 2022 · 34 citations · Full text

, , +17

1–5 of 11

Authors

94

  1. GK
    George Kettleborough

    Earlham Institute, United Kingdom

    2 publications · 457 citations

    2

    h-index

  2. KV
    Ksenia V. Krasileva

    University of California, Berkeley, United States

    2 publications · 457 citations

    2

    h-index

  3. DB
    Dan Bolser

    European Bioinformatics Institute, United Kingdom

    2 publications · 457 citations

    2

    h-index

  4. FD
    Federica Di Palma

    Broad Institute, United States

    2 publications · 457 citations

    2

    h-index

  5. GH
    Georg Haberer

    Helmholtz Zentrum München, Germany

    2 publications · 457 citations

    2

    h-index

1–5 of 94

Institutions

44

  1. ARC Centre of Excellence in Plant Energy Biology

    Perth, Australia

    2 h-index

    6 publications

    1.4K citations

  2. Earlham Institute

    Norwich, United Kingdom

    2 h-index

    43 publications

    9.6K citations

  3. University of East Anglia

    Norwich, United Kingdom

    2 h-index

    10 publications

    2.3K citations

  4. European Bioinformatics Institute

    Cambridge, United Kingdom

    2 h-index

    8 publications

    1.8K citations

  5. John Innes Centre

    Norwich, United Kingdom

    2 h-index

    13 publications

    3.2K citations

  6. Sainsbury Laboratory

    Norwich, United Kingdom

    2 h-index

    2 publications

    457 citations

  7. Helmholtz Zentrum München

    Munich, Germany

    2 h-index

    6 publications

    1.4K citations

  8. The University of Western Australia

    Perth, Australia

    2 h-index

    6 publications

    1.4K citations

1–8 of 44

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 50 citations

    3

    h-index

  2. Genome Research

    GR · 2 publications · 504 citations

    2

    h-index

  3. STAR Protocols

    1 publications · 34 citations

    1

    h-index

  4. Nature Biotechnology

    1 publications · 686 citations

    1

    h-index

  5. Structure

    1 publications · 16 citations

    1

    h-index

1–5