Concepedia

Structural Variant Calling

Structural Variant Calling is a computational method within genomic analysis that identifies and characterizes structural variations in DNA sequences by distinguishing large-scale genomic alterations, such as deletions, duplications, inversions, and translocations, from sequencing data relative to a reference genome.

37

Publications

22.3K

Citations

250

Authors

104

Institutions

Publications per year

2017–2026

23

Parents

Publications

37

The variant call format and VCFtools

Petr Danecek, Adam Auton, Gonçalo R. Abecasis et al. · Bioinformatics · 2011 · 17.8K citations · Full text

, , +17

Mapping and sequencing of structural variation from eight human genomes

Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue et al. · Nature · 2008 · 1.1K citations

, , +14

Comprehensive evaluation of structural variation detection algorithms for whole genome sequencing

Shunichi Kosugi, Yukihide Momozawa, Xiaoxi Liu et al. · Genome biology · 2019 · 588 citations · Full text

, , +17

Comprehensive evaluation and characterisation of short read general-purpose structural variant calling software

Daniel Cameron, Leon Di Stefano, Anthony T. Papenfuss · Nature Communications · 2019 · 387 citations · Full text

, , +17

Sequence-based characterization of structural variation in the mouse genome

Binnaz Yalcin, Kim Wong, Avigail Agam et al. · Nature · 2011 · 326 citations

, , +16

1–5 of 37

Authors

250

  1. CA
    Can Alkan

    Bilkent University, Türkiye

    3 publications · 1.2K citations

    3

    h-index

  2. AR
    Aaron R. Quinlan

    University of Utah, United States

    3 publications · 155 citations

    3

    h-index

  3. FH
    Fereydoun Hormozdiari

    University of Washington, United States

    3 publications · 144 citations

    3

    h-index

  4. EE
    Evan E. Eichler

    University of Washington, United States

    3 publications · 1.5K citations

    3

    h-index

  5. BS
    Brent S. Pedersen

    University of Utah, United States

    3 publications · 155 citations

    3

    h-index

1–5 of 250

Institutions

104

  1. Wellcome Sanger Institute

    Cambridge, United Kingdom

    5 h-index

    26 publications

    214.9K citations

  2. Star Center

    Jackson, United States

    3 h-index

    20 publications

    800 citations

  3. Broad Institute

    Cambridge, United States

    3 h-index

    25 publications

    217K citations

  4. University of Washington

    Seattle, United States

    3 h-index

    29 publications

    27.3K citations

  5. Howard Hughes Medical Institute

    Chevy Chase, United States

    3 h-index

    18 publications

    18.8K citations

  6. University of Utah

    Salt Lake City, United States

    3 h-index

    22 publications

    870 citations

  7. Stockholm University

    Stockholm, Sweden

    2 h-index

    2 publications

    218 citations

  8. Karolinska University Hospital

    Stockholm, Sweden

    2 h-index

    4 publications

    436 citations

1–8 of 104

Venues

  1. Genome biology

    8 publications · 1.3K citations

    8

    h-index

  2. Bioinformatics

    4 publications · 17.9K citations

    4

    h-index

  3. F1000Research

    3 publications · 264 citations

    3

    h-index

  4. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 3 publications · 46 citations

    3

    h-index

  5. GigaScience

    2 publications · 143 citations

    2

    h-index

1–5