Concepedia

State Transition Analysis

State Transition Analysis is a computational framework within temporal transcriptomics that models cellular identity changes over pseudotime by identifying and characterizing discrete progression events between transcriptional states in high-dimensional gene expression landscapes.

153

Publications

7.9K

Citations

498

Authors

285

Institutions

Publications per year

2017–2026

34

Parents

Publications

153

State transition analysis: a rule-based intrusion detection approach

K. Ilgun, Richard A. Kemmerer, Phillip Porras · IEEE Transactions on Software Engineering · 1995 · 754 citations

, , +15

muscat detects subpopulation-specific state transitions from multi-sample multi-condition single-cell transcriptomics data

Helena L. Crowell, Charlotte Soneson, Pierre‐Luc Germain et al. · Nature Communications · 2020 · 495 citations · Full text

, , +17

Fundamental patterns underlying gene expression profiles: Simplicity from complexity

Neal S. Holter, Madhusmita Mitra, Amos Maritan et al. · Proceedings of the National Academy of Sciences · 2000 · 476 citations · Full text

, , +13

USTAT: a real-time intrusion detection system for UNIX

K. Ilgun · 2002 · 261 citations

, , +11

Explaining changing-look AGN with state transition triggered by rapid mass accretion rate drop

Hirofumi Noda, Chris Done · Monthly Notices of the Royal Astronomical Society · 2018 · 241 citations · Full text

, , +14

1–5 of 153

Authors

498

  1. RA
    Richard A. Kemmerer

    University of California, Santa Barbara, United States

    4 publications · 1K citations

    4

    h-index

  2. MC
    M. Cenk Gursoy

    Syracuse University, United States

    3 publications · 169 citations

    3

    h-index

  3. PC
    Paul C. Kline

    Middle Tennessee State University, United States

    3 publications · 252 citations

    3

    h-index

  4. HG
    Hans Garmo

    King's College London, United Kingdom

    3 publications · 51 citations

    3

    h-index

  5. PS
    Pär Stattin

    Umeå University, Sweden

    3 publications · 51 citations

    3

    h-index

1–5 of 498

Institutions

285

  1. Albert Einstein College of Medicine

    Bronx, United States

    5 h-index

    6 publications

    509 citations

  2. University of Illinois Urbana-Champaign

    Urbana, United States

    4 h-index

    6 publications

    277 citations

  3. Tsinghua University

    Beijing, China

    4 h-index

    5 publications

    105 citations

  4. University of California, Santa Barbara

    Santa Barbara, United States

    4 h-index

    8 publications

    2.3K citations

  5. Harvard University

    Cambridge, United States

    4 h-index

    15 publications

    1.7K citations

  6. Chinese Academy of Sciences

    Beijing, China

    4 h-index

    15 publications

    473 citations

  7. Reliable Software Resources (United States)

    Northville, United States

    4 h-index

    7 publications

    1.6K citations

  8. École Polytechnique Fédérale de Lausanne

    Lausanne, Switzerland

    4 h-index

    6 publications

    633 citations

1–8 of 285

Venues

  1. Biochemistry

    6 publications · 442 citations

    6

    h-index

  2. PLoS ONE

    5 publications · 245 citations

    5

    h-index

  3. Journal of the American Chemical Society

    JACS · 3 publications · 116 citations

    3

    h-index

  4. Nature Communications

    2 publications · 545 citations

    2

    h-index

  5. Organic & Biomolecular Chemistry

    2 publications · 49 citations

    2

    h-index

1–5