Concepedia

Spatial Gene Expression Profiling

Spatial Gene Expression Profiling is a molecular biology technique that characterizes the spatially resolved distribution of gene activity within preserved tissue architectures, thereby distinguishing it from conventional bulk or single-cell expression analyses by maintaining the positional context of transcriptional signals.

217

Publications

22.9K

Citations

1.6K

Authors

555

Institutions

Publications per year

2017–2026

157

Parents

Publications

217

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics

Patrik L. Ståhl, Fredrik Salmén, Sanja Vicković et al. · Science · 2016 · 3.9K citations

, , +17

Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex

Kristen R. Maynard, Leonardo Collado‐Torres, Lukas M. Weber et al. · Nature Neuroscience · 2021 · 1.2K citations · Full text

, , +15

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

Jian Hu, Xiangjie Li, Kyle Coleman et al. · Nature Methods · 2021 · 1.1K citations

, , +17

Multiplex digital spatial profiling of proteins and RNA in fixed tissue

Christopher R. B. Merritt, Giang T. Ong, S. Church et al. · Nature Biotechnology · 2020 · 1.1K citations

, , +12

SpatialDE: identification of spatially variable genes

Valentine Svensson, Sarah A. Teichmann, Oliver Stegle · Nature Methods · 2018 · 797 citations · Full text

, , +12

1–5 of 217

Authors

1.6K

  1. JL
    Joakim Lundeberg

    KTH Royal Institute of Technology, Sweden

    9 publications · 5.1K citations

    9

    h-index

  2. KM
    Keri Martinowich

    Lieber Institute for Brain Development, United States

    10 publications · 1.8K citations

    9

    h-index

  3. KR
    Kristen R. Maynard

    Johns Hopkins University, United States

    10 publications · 1.8K citations

    9

    h-index

  4. SC
    Stephanie C. Hicks

    Johns Hopkins University, United States

    10 publications · 1.8K citations

    9

    h-index

  5. JB
    Joseph Beechem

    Nanostring Technologies (United States), United States

    7 publications · 1.9K citations

    7

    h-index

1–5 of 1.6K

Institutions

555

  1. Science for Life Laboratory

    Stockholm, Sweden

    14 h-index

    68 publications

    58.6K citations

  2. Johns Hopkins University

    Baltimore, United States

    12 h-index

    108 publications

    22K citations

  3. Harvard University

    Cambridge, United States

    12 h-index

    40 publications

    3.1K citations

  4. Chinese Academy of Sciences

    Beijing, China

    10 h-index

    33 publications

    1.3K citations

  5. KTH Royal Institute of Technology

    Stockholm, Sweden

    10 h-index

    52 publications

    48.9K citations

  6. Karolinska Institutet

    Stockholm, Sweden

    10 h-index

    36 publications

    38.3K citations

  7. Lieber Institute for Brain Development

    Baltimore, United States

    9 h-index

    111 publications

    18.8K citations

  8. Stanford University

    Stanford, United States

    9 h-index

    24 publications

    4.8K citations

1–8 of 555

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 28 publications · 861 citations

    18

    h-index

  2. Bioinformatics

    15 publications · 731 citations

    14

    h-index

  3. Nature Communications

    13 publications · 1.7K citations

    13

    h-index

  4. Nature Methods

    8 publications · 3.4K citations

    8

    h-index

  5. BMC Genomics

    7 publications · 592 citations

    7

    h-index

1–5