Concepedia

Single-cell Spatial Integration

Single-Cell Spatial Integration is a computational framework that jointly analyzes single-cell resolution molecular profiles with spatially resolved tissue architectures to map gene expression dynamics within their native anatomical contexts.

25

Publications

4K

Citations

268

Authors

87

Institutions

Publications per year

2017–2026

22

Parents

Publications

25

Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

Etsuo A. Susaki, Kazuki Tainaka, Dimitri Perrin et al. · Cell · 2014 · 1.4K citations · Full text

, , +13

Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and Hair Follicle Heterogeneity

Simon Joost, Amit Zeisel, Tina Jacob et al. · Cell Systems · 2016 · 459 citations · Full text

, , +16

Transcriptome in vivo analysis (TIVA) of spatially defined single cells in live tissue

Ditte Lovatt, Brittani K. Ruble, Jaehee Lee et al. · Nature Methods · 2014 · 289 citations · Full text

, , +16

Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface

Miranda V. Hunter, Reuben Moncada, Joshua M. Weiss et al. · Nature Communications · 2021 · 285 citations · Full text

, , +17

An interactive framework for whole-brain maps at cellular resolution

Daniel Fürth, Thomas Vaissière, Ourania Tzortzi et al. · Nature Neuroscience · 2017 · 266 citations · Full text

, , +16

1–5 of 25

Authors

268

  1. MB
    Michael Borja

    Chan Zuckerberg Initiative (United States), United States

    2 publications · 115 citations

    2

    h-index

  2. JH
    Jiang He

    University of Massachusetts Chan Medical School, United States

    2 publications · 115 citations

    2

    h-index

  3. KA
    Kyle Awayan

    Chan Zuckerberg Initiative (United States), United States

    2 publications · 115 citations

    2

    h-index

  4. VT
    Vanessa Tran

    University of California, San Francisco, United States

    2 publications · 115 citations

    2

    h-index

  5. BW
    Bruce Wang

    University of California, San Francisco, United States

    2 publications · 115 citations

    2

    h-index

1–5 of 268

Institutions

87

  1. Memorial Sloan Kettering Cancer Center

    New York, United States

    3 h-index

    8 publications

    955 citations

  2. University of Cambridge

    Cambridge, United Kingdom

    3 h-index

    12 publications

    419 citations

  3. University of California, San Francisco

    San Francisco, United States

    3 h-index

    21 publications

    2.1K citations

  4. Chan Zuckerberg Initiative (United States)

    Redwood City, United States

    3 h-index

    26 publications

    1.7K citations

  5. Stanford University

    Stanford, United States

    3 h-index

    12 publications

    1.2K citations

  6. University of Pennsylvania

    Philadelphia, United States

    3 h-index

    23 publications

    5.9K citations

  7. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    19 publications

    1.5K citations

  8. University of California San Diego

    San Diego, United States

    2 h-index

    35 publications

    4.8K citations

1–8 of 87

Venues

  1. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 6 publications · 206 citations

    6

    h-index

  2. Nature Communications

    2 publications · 346 citations

    2

    h-index

  3. Nature Methods

    2 publications · 322 citations

    2

    h-index

  4. Nature Biotechnology

    1 publications · 102 citations

    1

    h-index

  5. Nature Genetics

    1 publications · 103 citations

    1

    h-index

1–5