Concepedia

Single-cell Genomics Integration

Single-Cell Genomics Integration is a computational framework that synthesizes multi-omics data at the individual cell level to reconstruct coherent biological states and regulatory dynamics, distinguished from bulk-level integration methods by its resolution of cellular heterogeneity and cell-type-specific molecular interactions.

8

Publications

1.2K

Citations

94

Authors

29

Institutions

Publications per year

2017–2026

8

Parents

Publications

8

scMC learns biological variation through the alignment of multiple single-cell genomics datasets

Lihua Zhang, Qing Nie · Genome biology · 2021 · 866 citations · Full text

, , +16

A sandbox for prediction and integration of DNA, RNA, and proteins in single cells

Malte D. Luecken, Daniel B. Burkhardt, Robrecht Cannoodt et al. · Ghent University Academic Bibliography (Ghent University) · 2021 · 91 citations

, , +12

UINMF performs mosaic integration of single-cell multi-omic datasets using nonnegative matrix factorization

April R. Kriebel, Joshua D. Welch · Nature Communications · 2022 · 82 citations · Full text

, , +17

Integrating single-cell multi-omics and prior biological knowledge for a functional characterization of the immune system

Philipp Schäfer, Daniel Dimitrov, Eduardo J. Villablanca et al. · Nature Immunology · 2024 · 56 citations

, , +17

Integrated electrophysiological and genomic profiles of single cells reveal spiking tumor cells in human glioma

Rachel Naomi Curry, Qianqian Ma, Malcolm F. McDonald et al. · Cancer Cell · 2024 · 41 citations · Full text

, , +17

1–5 of 8

Authors

94

  1. QY
    Qiuyue Yuan

    National Center for Mathematics and Interdisciplinary Sciences, China

    1 publications · 17 citations

    1

    h-index

  2. EB
    Edward B. Lee

    University of Pennsylvania, United States

    1 publications · 40 citations

    1

    h-index

  3. YJ
    Yang Joon Kim

    Chan Zuckerberg Initiative (United States), United States

    1 publications · 91 citations

    1

    h-index

  4. EJ
    Eduardo J. Villablanca

    Karolinska Institutet, Sweden

    1 publications · 56 citations

    1

    h-index

  5. RC
    Robrecht Cannoodt

    VIB-UGent Center for Inflammation Research, Belgium

    1 publications · 91 citations

    1

    h-index

1–5 of 94

Institutions

29

  1. Institute of Science and Technology Austria

    Klosterneuburg, Austria

    1 h-index

    1 publications

    91 citations

  2. California Institute of Technology

    Pasadena, United States

    1 h-index

    1 publications

    91 citations

  3. University of California, Berkeley

    Berkeley, United States

    1 h-index

    1 publications

    91 citations

  4. Ghent University Hospital

    Ghent, Belgium

    1 h-index

    2 publications

    182 citations

  5. King's College London

    London, United Kingdom

    1 h-index

    1 publications

    91 citations

  6. University of Pennsylvania

    Philadelphia, United States

    1 h-index

    3 publications

    120 citations

  7. Golestan University

    Gorgan, Iran

    1 h-index

    1 publications

    91 citations

  8. Helmholtz Zentrum München

    Munich, Germany

    1 h-index

    2 publications

    182 citations

1–8 of 29

Venues

  1. Genome biology

    2 publications · 883 citations

    2

    h-index

  2. Cell

    1 publications · 40 citations

    1

    h-index

  3. Nature Immunology

    1 publications · 56 citations

    1

    h-index

  4. Cancer Cell

    1 publications · 41 citations

    1

    h-index

  5. Nature Communications

    1 publications · 82 citations

    1

    h-index

1–5