Concepedia

Sequence Similarity Thresholds

Sequence Similarity Thresholds is a metric in microbial phylogenetics that defines the minimum level of nucleotide sequence identity required to group 16S ribosomal RNA gene sequences into Operational Taxonomic Units, thereby delineating microbial taxa based on evolutionary relatedness.

158

Publications

23.7K

Citations

641

Authors

300

Institutions

Publications per year

2017–2026

43

Parents

Publications

158

Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes

Mincheol Kim, Hyun‐Seok Oh, Sang‐Cheol Park et al. · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · 2014 · 3.1K citations

, , +17

A general species delimitation method with applications to phylogenetic placements

Jiajie Zhang, Paschalia Kapli, Pavlos Pavlidis et al. · Bioinformatics · 2013 · 3K citations · Full text

, , +17

Prediction of protein subcellular localization

Chin‐Sheng Yu, Yu‐Chi Chen, Chih‐Hao Lu et al. · Proteins Structure Function and Bioinformatics · 2006 · 1.9K citations

, , +16

Database of homology‐derived protein structures and the structural meaning of sequence alignment

Chris Sander, Reinhard Schneider · Proteins Structure Function and Bioinformatics · 1991 · 1.7K citations · Full text

, , +16

VIRIDIC—A Novel Tool to Calculate the Intergenomic Similarities of Prokaryote-Infecting Viruses

Cristina Moraru, Arvind Varsani, Andrew M. Kropinski · Viruses · 2020 · 795 citations · Full text

, , +15

1–5 of 158

Authors

641

  1. ES
    Edoardo Saccenti

    Wageningen University & Research, Netherlands

    3 publications · 68 citations

    3

    h-index

  2. JJ
    Jasper J. Koehorst

    Wageningen University & Research, Netherlands

    3 publications · 68 citations

    3

    h-index

  3. PJ
    Peter J. Schaap

    Wageningen University & Research, Netherlands

    3 publications · 68 citations

    3

    h-index

  4. DR
    Didier Raoult

    Centre National de la Recherche Scientifique, France

    3 publications · 406 citations

    3

    h-index

  5. VA
    Vítor A. P. Martins dos Santos

    Wageningen University & Research, Netherlands

    3 publications · 68 citations

    3

    h-index

1–5 of 641

Institutions

300

  1. Centre National de la Recherche Scientifique

    Paris, France

    7 h-index

    20 publications

    1.8K citations

  2. University of Copenhagen

    Copenhagen, Denmark

    5 h-index

    10 publications

    3.8K citations

  3. Wageningen University & Research

    Wageningen, The Netherlands

    4 h-index

    20 publications

    2.3K citations

  4. University of Guelph

    Guelph, Canada

    4 h-index

    9 publications

    2K citations

  5. Inserm

    Paris, France

    4 h-index

    14 publications

    1.7K citations

  6. European Bioinformatics Institute

    Cambridge, United Kingdom

    4 h-index

    8 publications

    395 citations

  7. Natural History Museum Aarhus

    Aarhus, Denmark

    3 h-index

    7 publications

    3.3K citations

  8. Centers for Disease Control and Prevention

    Atlanta, United States

    3 h-index

    4 publications

    327 citations

1–8 of 300

Venues

  1. Bioinformatics

    10 publications · 5.4K citations

    11

    h-index

  2. 11

    h-index

  3. BMC Bioinformatics

    7 publications · 230 citations

    7

    h-index

  4. Molecular Ecology Resources

    6 publications · 305 citations

    6

    h-index

  5. Computer applications in the biosciences

    CABIOS · 5 publications · 319 citations

    5

    h-index

1–5