Concepedia

Sequence Alignment Uncertainty

Sequence Alignment Uncertainty is a metric that quantifies the confidence or variability in the positional homology assignments among biological sequences within a multiple sequence alignment used in ancestral sequence reconstruction.

38

Publications

5.8K

Citations

93

Authors

56

Institutions

Publications per year

2017–2026

7

Parents

Publications

38

GUIDANCE2: accurate detection of unreliable alignment regions accounting for the uncertainty of multiple parameters

Itamar Sela, Haim Ashkenazy, Kazutaka Katoh et al. · Nucleic Acids Research · 2015 · 887 citations · Full text

, , +12

GUIDANCE: a web server for assessing alignment confidence scores

O.C.K.M. Penn, Eran Privman, Haim Ashkenazy et al. · Nucleic Acids Research · 2010 · 632 citations · Full text

, , +12

Alignment Uncertainty and Genomic Analysis

Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck · Science · 2008 · 425 citations

, , +12

A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation

Sean R. Eddy · PLoS Computational Biology · 2008 · 359 citations · Full text

, , +13

Integrating Ambiguously Aligned Regions of DNA Sequences in Phylogenetic Analyses Without Violating Positional Homology

François Lutzoni, Peter J. Wagner, Valérie Reeb et al. · Systematic Biology · 2000 · 356 citations · Full text

, , +16

1–5 of 38

Authors

93

  1. GL
    Giddy Landan

    Christian-Albrechts-Universität zu Kiel, Germany

    4 publications · 1.2K citations

    4

    h-index

  2. JH
    Jotun Hein

    University of Oxford, United Kingdom

    4 publications · 247 citations

    4

    h-index

  3. DG
    Dan Graur

    Tel Aviv University, Israel

    4 publications · 1.2K citations

    4

    h-index

  4. TP
    Tal Pupko

    Tel Aviv University, Israel

    3 publications · 1.9K citations

    3

    h-index

  5. MA
    Marc A. Suchard

    University of California, Los Angeles, United States

    3 publications · 840 citations

    3

    h-index

1–5 of 93

Institutions

56

  1. University of Oxford

    Oxford, United Kingdom

    4 h-index

    18 publications

    1.3K citations

  2. University of Houston

    Houston, United States

    4 h-index

    11 publications

    4.4K citations

  3. Tel Aviv University

    Tel Aviv, Israel

    3 h-index

    12 publications

    7.5K citations

  4. University of California, Los Angeles

    Los Angeles, United States

    3 h-index

    6 publications

    2K citations

  5. Institut Pasteur

    Paris, France

    2 h-index

    2 publications

    32 citations

  6. Saarland University

    Saarbrücken, Germany

    2 h-index

    3 publications

    319 citations

  7. Centre for Genomic Regulation

    Barcelona, Spain

    2 h-index

    7 publications

    116 citations

  8. Max Planck Institute for Informatics

    Saarbrücken, Germany

    2 h-index

    3 publications

    319 citations

1–8 of 56

Venues

  1. Molecular Biology and Evolution

    MBE · 4 publications · 788 citations

    4

    h-index

  2. BMC Evolutionary Biology

    3 publications · 145 citations

    3

    h-index

  3. PLoS Computational Biology

    3 publications · 426 citations

    3

    h-index

  4. Systematic Biology

    3 publications · 694 citations

    3

    h-index

  5. Nucleic Acids Research

    3 publications · 1.6K citations

    3

    h-index

1–5