Concepedia

Rna Sequence Design Algorithms

RNA Sequence Design Algorithms is a computational methodology that systematically generates RNA nucleotide sequences to achieve desired structural, functional, or regulatory properties within synthetic biological circuits, distinguished from general biosequence design methods by its focus on RNA-specific folding dynamics, kinetic constraints, and post-transcriptional control functions.

42

Publications

1.9K

Citations

105

Authors

65

Institutions

Publications per year

2017–2026

14

Parents

Publications

42

RNA design rules from a massive open laboratory

Jeehyung Lee, Wipapat Kladwang, Min Jae Lee et al. · Proceedings of the National Academy of Sciences · 2014 · 320 citations · Full text

, , +14

De novo automated design of small RNA circuits for engineering synthetic riboregulation in living cells

Guillermo Rodrigo, Thomas E. Landrain, Alfonso Jaramillo · Proceedings of the National Academy of Sciences · 2012 · 177 citations · Full text

, , +17

INFO-RNA—a fast approach to inverse RNA folding

Anke Busch, Rolf Backofen · Bioinformatics · 2006 · 150 citations · Full text

, , +12

Computational strategies for the automated design of RNA nanoscale structures from building blocks using NanoTiler

Eckart Bindewald, Calvin Grunewald, Brett Boyle et al. · Journal of Molecular Graphics and Modelling · 2008 · 90 citations · Full text

, , +16

MODENA: a multi-objective RNA inverse folding

Akito Taneda · Advances and Applications in Bioinformatics and Chemistry · 2010 · 75 citations · Full text

, , +13

1–5 of 42

Authors

105

  1. YP
    Yann Ponty

    École Polytechnique, France

    5 publications · 163 citations

    5

    h-index

  2. JW
    Jérôme Waldispühl

    McGill University, Canada

    3 publications · 120 citations

    3

    h-index

  3. RB
    Rolf Backofen

    University of Freiburg, Germany

    3 publications · 244 citations

    3

    h-index

  4. AT
    Akito Taneda

    Hirosaki University, Japan

    3 publications · 156 citations

    3

    h-index

  5. LH
    Liang Huang

    Oregon State University, United States

    1 publications · 21 citations

    2

    h-index

1–5 of 105

Institutions

65

  1. Laboratoire d'Informatique de l'École Polytechnique

    Palaiseau, France

    6 h-index

    14 publications

    492 citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    10 publications

    688 citations

  3. École Polytechnique

    Palaiseau, France

    4 h-index

    6 publications

    174 citations

  4. Hirosaki University

    Hirosaki, Japan

    3 h-index

    3 publications

    156 citations

  5. Stanford University

    Stanford, United States

    3 h-index

    11 publications

    708 citations

  6. The University of Tokyo

    Tokyo, Japan

    3 h-index

    4 publications

    94 citations

  7. University of Freiburg

    Freiburg im Breisgau, Germany

    3 h-index

    7 publications

    545 citations

  8. McGill University

    Montreal, Canada

    3 h-index

    11 publications

    455 citations

1–8 of 65

Venues

  1. Bioinformatics

    7 publications · 392 citations

    7

    h-index

  2. Nucleic Acids Research

    6 publications · 185 citations

    6

    h-index

  3. arXiv (Cornell University)

    Repository · 2 publications · 47 citations

    3

    h-index

  4. PLoS Computational Biology

    2 publications · 81 citations

    2

    h-index

  5. Journal of Computational Biology

    1 publications · 38 citations

    2

    h-index

1–5