Concepedia

Rna Sequence Alignment

RNA Sequence Alignment is a computational method within bioinformatics that specifically aligns ribonucleic acid sequences by optimizing the correspondence between nucleotide positions to infer structural, functional, or evolutionary relationships, distinguished from other sequence alignment types by its focus on RNA-specific features such as secondary structure constraints and post-transcriptional modifications.

449

Publications

113.4K

Citations

1.4K

Authors

578

Institutions

Publications per year

2017–2026

77

Parents

Publications

449

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin, Carrie Davis, Felix Schlesinger et al. · Bioinformatics · 2012 · 56.2K citations · Full text

, , +17

Infernal 1.1: 100-fold faster RNA homology searches

Eric P. Nawrocki, Sean R. Eddy · Bioinformatics · 2013 · 3.9K citations · Full text

, , +16

Recent developments in the MAFFT multiple sequence alignment program

Kazutaka Katoh, Hidehiro Toh · Briefings in Bioinformatics · 2008 · 3.7K citations

, , +12

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

Elmar Pruesse, Jörg Peplies, Frank Oliver Glöckner · Bioinformatics · 2012 · 3.2K citations · Full text

, , +13

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

Ting‐Di Wu, C.K. Watanabe · Computer applications in the biosciences · 2005 · 2.7K citations · Full text

, , +17

1–5 of 449

Authors

1.4K

  1. JG
    Jan Gorodkin

    University of Copenhagen, Denmark

    19 publications · 1.5K citations

    17

    h-index

  2. SR
    Sean R. Eddy

    Howard Hughes Medical Institute, United States

    15 publications · 10.1K citations

    15

    h-index

  3. KA
    Kiyoshi Asai

    The University of Tokyo, Japan

    15 publications · 1.2K citations

    14

    h-index

  4. RB
    Rolf Backofen

    University of Freiburg, Germany

    15 publications · 1K citations

    14

    h-index

  5. KS
    Kengo Sato

    Keio University, Japan

    11 publications · 1K citations

    11

    h-index

1–5 of 1.4K

Institutions

578

  1. University of Copenhagen

    Copenhagen, Denmark

    19 h-index

    61 publications

    4.5K citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    15 h-index

    57 publications

    2.9K citations

  3. The University of Tokyo

    Tokyo, Japan

    15 h-index

    44 publications

    4.1K citations

  4. Howard Hughes Medical Institute

    Chevy Chase, United States

    15 h-index

    46 publications

    21.2K citations

  5. National Institute of Advanced Industrial Science and Technology

    Tsukuba, Japan

    14 h-index

    47 publications

    4.7K citations

  6. University of Freiburg

    Freiburg im Breisgau, Germany

    14 h-index

    44 publications

    3K citations

  7. University of Vienna

    Vienna, Austria

    11 h-index

    26 publications

    4.5K citations

  8. Keio University

    Tokyo, Japan

    9 h-index

    22 publications

    1.2K citations

1–8 of 578

Venues

  1. Bioinformatics

    73 publications · 70.6K citations

    44

    h-index

  2. Nucleic Acids Research

    68 publications · 11.7K citations

    42

    h-index

  3. BMC Bioinformatics

    31 publications · 4.3K citations

    23

    h-index

  4. Journal of General Virology

    13 publications · 751 citations

    13

    h-index

  5. RNA

    13 publications · 1.3K citations

    13

    h-index

1–5