Concepedia

Reference-free Validation

Reference-Free Validation is a validation methodology that assesses the quality or correctness of genomic assemblies without relying on a reference genome, distinguishing itself from reference-based approaches by independently evaluating assembly accuracy through intrinsic properties such as sequence consistency, coverage, and structural plausibility.

23

Publications

5.8K

Citations

114

Authors

52

Institutions

Publications per year

2017–2026

15

Parents

Publications

23

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · Genome biology · 2020 · 3.5K citations · Full text

, , +17

Reference-free identification of components of checkerboard-evoked multichannel potential fields

Dietrich Lehmann, Wolfgang Skrandies · Electroencephalography and Clinical Neurophysiology · 1980 · 1.6K citations

, , +14

Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis

Veronika Dubinkina, Dmitry Ischenko, Vladimir Ulyantsev et al. · BMC Bioinformatics · 2016 · 89 citations · Full text

, , +13

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies

Arang Rhie, Brian P. Walenz, Sergey Koren et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2020 · 73 citations · Full text

, , +17

Design and Evaluation of a Retrieval-Augmented Generation Architecture for OWASP Security Data

arXiv (Cornell University) · 2023 · 68 citations · Full text

, , +15

1–5 of 23

Authors

114

  1. SK
    Sergey Koren

    National Human Genome Research Institute, United States

    2 publications · 3.6K citations

    2

    h-index

  2. BP
    Brian P. Walenz

    National Human Genome Research Institute, United States

    2 publications · 3.6K citations

    2

    h-index

  3. AR
    Arang Rhie

    National Human Genome Research Institute, United States

    2 publications · 3.6K citations

    2

    h-index

  4. AM
    Adam M. Phillippy

    National Human Genome Research Institute, United States

    2 publications · 3.6K citations

    2

    h-index

  5. HL
    Haozhe Lyu

    1 publications · 21 citations

    1

    h-index

1–5 of 114

Institutions

52

  1. National Human Genome Research Institute

    Bethesda, United States

    2 h-index

    8 publications

    14.4K citations

  2. University of Helsinki

    Helsinki, Finland

    2 h-index

    5 publications

    190 citations

  3. National Institutes of Health

    Bethesda, United States

    2 h-index

    8 publications

    14.4K citations

  4. Deutsches Diabetes-Zentrum e.V.

    Düsseldorf, Germany

    1 h-index

    1 publications

    42 citations

  5. Kyoto College of Graduate Studies for Informatics

    Kyoto, Japan

    1 h-index

    3 publications

    123 citations

  6. Pennsylvania State University

    State College, United States

    1 h-index

    4 publications

    148 citations

  7. University of Pisa

    Pisa, Italy

    1 h-index

    3 publications

    93 citations

  8. University Hospital of Zurich

    Zurich, Switzerland

    1 h-index

    2 publications

    3.2K citations

1–8 of 52

Venues

  1. arXiv (Cornell University)

    Repository · 3 publications · 106 citations

    3

    h-index

  2. Genome biology

    2 publications · 3.6K citations

    2

    h-index

  3. BMC Bioinformatics

    2 publications · 105 citations

    2

    h-index

  4. Analytica Chimica Acta

    1 publications · 44 citations

    1

    h-index

  5. Entropy

    1 publications · 22 citations

    1

    h-index

1–5