Concepedia

Reference Genome Conversion

Reference Genome Conversion is a computational method that transforms genomic data aligned to one reference genome into alignment coordinates or sequences corresponding to an alternative reference genome, enabling cross-reference comparability in genomic analyses.

10

Publications

2.3K

Citations

61

Authors

33

Institutions

Publications per year

2017–2026

8

Variants

Genome LiftoverLiftover

Parents

Publications

10

Gfastats: conversion, evaluation and manipulation of genome sequences using assembly graphs

Giulio Formenti, Linelle Abueg, Angelo Brajuka et al. · Bioinformatics · 2022 · 1.1K citations · Full text

, , +14

CrossMap: a versatile tool for coordinate conversion between genome assemblies

Hao Zhao, Zhifu Sun, Jing Wang et al. · Bioinformatics · 2013 · 868 citations · Full text

, , +14

<i>Trans</i> genomic capture and sequencing of primate exomes reveals new targets of positive selection

Renee D. George, Graham McVicker, Rachel Diederich et al. · Genome Research · 2011 · 103 citations · Full text

, , +16

Similarities and differences between variants called with human reference genome HG19 or HG38

Bohu Pan, Rebecca Kusko, Wenming Xiao et al. · BMC Bioinformatics · 2019 · 82 citations · Full text

, , +17

Benchmark study comparing liftover tools for genome conversion of epigenome sequencing data

Phuc‐Loi Luu, Phuc Thinh Ong, Thanh-Phuoc Dinh et al. · NAR Genomics and Bioinformatics · 2020 · 38 citations · Full text

, , +12

1–5 of 10

Authors

61

  1. BG
    Bo Gao

    Jining Medical University, China

    2 publications · 50 citations

    2

    h-index

  2. QH
    Qingyao Huang

    SIB Swiss Institute of Bioinformatics, Switzerland

    2 publications · 50 citations

    2

    h-index

  3. MB
    Michael Baudis

    University of Zurich, Switzerland

    2 publications · 50 citations

    2

    h-index

  4. SJ
    Susan J. Clark

    Garvan Institute of Medical Research, Australia

    1 publications · 38 citations

    1

    h-index

  5. JK
    Jean‐Pierre Kocher

    Mayo Clinic, United States

    1 publications · 868 citations

    1

    h-index

1–5 of 61

Institutions

33

  1. SIB Swiss Institute of Bioinformatics

    Lausanne, Switzerland

    2 h-index

    6 publications

    150 citations

  2. University of Zurich

    Zurich, Switzerland

    2 h-index

    6 publications

    150 citations

  3. Sanya University

    Sanya, China

    1 h-index

    1 publications

    14 citations

  4. University of Chicago

    Chicago, United States

    1 h-index

    1 publications

    103 citations

  5. Nong Lam University Ho Chi Minh City

    Ho Chi Minh City, Vietnam

    1 h-index

    1 publications

    38 citations

  6. Weill Cornell Medicine

    New York, United States

    1 h-index

    1 publications

    1.1K citations

  7. China Agricultural University

    Beijing, China

    1 h-index

    1 publications

    14 citations

  8. MIND Research Institute

    Irvine, United States

    1 h-index

    1 publications

    1.1K citations

1–8 of 33

Venues

  1. Bioinformatics

    2 publications · 2K citations

    2

    h-index

  2. F1000Research

    2 publications · 50 citations

    2

    h-index

  3. Human Genetics and Genomics Advances

    1 publications · 17 citations

    1

    h-index

  4. BMC Bioinformatics

    1 publications · 82 citations

    1

    h-index

  5. NAR Genomics and Bioinformatics

    1 publications · 38 citations

    1

    h-index

1–5