Concepedia

Read-based Annotation

Read-Based Annotation is a metagenomic annotation approach that directly assigns functional or taxonomic labels to individual sequencing reads without prior assembly, distinguishing it from assembly-based methods by preserving raw read-level information for downstream analysis.

29

Publications

2.6K

Citations

138

Authors

69

Institutions

Publications per year

2017–2026

15

Variants

Read-based Metagenomic Annotation

Parents

Publications

29

FragGeneScan: predicting genes in short and error-prone reads

Mina Rho, Haixu Tang, Yuzhen Ye · Nucleic Acids Research · 2010 · 896 citations · Full text

, , +17

<i>Consed:</i> a graphical editor for next-generation sequencing

David Gordon, Phil Green · Bioinformatics · 2013 · 317 citations · Full text

, , +17

Intrinsic errors in genome annotation

Damien P. Devos, Alfonso Valencia · Trends in Genetics · 2001 · 289 citations

, , +14

Higher classification sensitivity of short metagenomic reads with CLARK- <i>S</i>

Rachid Ounit, Stefano Lonardi · Bioinformatics · 2016 · 149 citations · Full text

, , +12

The effect of sequencing errors on metagenomic gene prediction

Katharina J. Hoff · BMC Genomics · 2009 · 109 citations · Full text

, , +17

1–5 of 29

Authors

138

  1. HC
    Henry C. M. Leung

    University of Hong Kong, Hong Kong SAR China

    1 publications · 57 citations

    1

    h-index

  2. LZ
    Liping Zhao

    Shanghai Jiao Tong University, China

    1 publications · 53 citations

    1

    h-index

  3. AP
    Alice Pajoro

    Wageningen University & Research, Netherlands

    1 publications · 68 citations

    1

    h-index

  4. JP
    Jonathan P. Zehr

    University of California, Santa Cruz, United States

    1 publications · 50 citations

    1

    h-index

  5. AW
    Annabel Whibley

    Centre National de la Recherche Scientifique, France

    1 publications · 44 citations

    1

    h-index

1–5 of 138

Institutions

69

  1. Wageningen University & Research

    Wageningen, The Netherlands

    2 h-index

    7 publications

    437 citations

  2. Shanghai Jiao Tong University

    Shanghai, China

    2 h-index

    3 publications

    148 citations

  3. Inserm

    Paris, France

    2 h-index

    13 publications

    346 citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    2 h-index

    12 publications

    304 citations

  5. Innovative Genomics Institute

    Berkeley, United States

    1 h-index

    1 publications

    18 citations

  6. Université Paris Sciences et Lettres

    Paris, France

    1 h-index

    8 publications

    136 citations

  7. University of Iceland

    Reykjavik, Iceland

    1 h-index

    1 publications

    18 citations

  8. Temple University

    Philadelphia, United States

    1 h-index

    1 publications

    65 citations

1–8 of 69

Venues

  1. Bioinformatics

    7 publications · 566 citations

    7

    h-index

  2. BMC Genomics

    4 publications · 219 citations

    4

    h-index

  3. Nucleic Acids Research

    3 publications · 999 citations

    3

    h-index

  4. BMC Bioinformatics

    2 publications · 69 citations

    2

    h-index

  5. 1

    h-index

1–5