Concepedia

Ramachandran Analysis

Ramachandran Analysis is a computational method in structural biology that characterizes the allowed conformational states of polypeptide backbones by plotting the dihedral angles φ (phi) and ψ (psi) of amino acid residues to assess the stereochemical feasibility of protein secondary structures.

635

Publications

88.2K

Citations

2.2K

Authors

740

Institutions

Publications per year

2017–2026

104

Parents

Publications

635

Features and development of <i>Coot</i>

Paul Emsley, Bernhard Lohkamp, W. G. Scott et al. · Acta Crystallographica Section D Biological Crystallography · 2010 · 29.6K citations · Full text

, , +16

<i>MolProbity</i>: all-atom structure validation for macromolecular crystallography

Vincent B. Chen, W.B. Arendall, Jeffrey J. Headd et al. · Acta Crystallographica Section D Biological Crystallography · 2009 · 14.7K citations · Full text

, , +17

Optimization of the Additive CHARMM All-Atom Protein Force Field Targeting Improved Sampling of the Backbone ϕ, ψ and Side-Chain χ<sub>1</sub> and χ<sub>2</sub> Dihedral Angles

Robert B. Best, Xiao Zhu, Jihyun Shim et al. · Journal of Chemical Theory and Computation · 2012 · 4.8K citations

, , +17

Structure validation by Cα geometry: ϕ,ψ and Cβ deviation

Simon C. Lovell, Ian Davis, W.B. Arendall et al. · Proteins Structure Function and Bioinformatics · 2003 · 4.6K citations

, , +17

STRIDE: a web server for secondary structure assignment from known atomic coordinates of proteins

Matthias Heinig, Dmitrij Frishman · Nucleic Acids Research · 2004 · 1.1K citations · Full text

, , +14

1–5 of 635

Authors

2.2K

  1. IG
    Imre G. Csizmadia

    University of Toronto, Canada

    17 publications · 781 citations

    15

    h-index

  2. AP
    András Perczel

    Eötvös Loránd University, Hungary

    13 publications · 698 citations

    13

    h-index

  3. CR
    C. Ramakrishnan

    Indian Institute of Science Bangalore, India

    9 publications · 410 citations

    9

    h-index

  4. RS
    Reinhard Schweitzer‐Stenner

    Drexel University, United States

    8 publications · 392 citations

    8

    h-index

  5. ÖF
    Ödön Farkas

    Eötvös Loránd University, Hungary

    6 publications · 239 citations

    6

    h-index

1–5 of 2.2K

Institutions

740

  1. Eötvös Loránd University

    Budapest, Hungary

    16 h-index

    47 publications

    1.6K citations

  2. University of Toronto

    Toronto, Canada

    15 h-index

    49 publications

    1.5K citations

  3. Indian Institute of Science Bangalore

    Bengaluru, India

    14 h-index

    50 publications

    2.5K citations

  4. Centre National de la Recherche Scientifique

    Paris, France

    14 h-index

    43 publications

    2.1K citations

  5. University of Oxford

    Oxford, United Kingdom

    11 h-index

    14 publications

    30.1K citations

  6. Cornell University

    Ithaca, United States

    8 h-index

    26 publications

    1.3K citations

  7. Johns Hopkins University

    Baltimore, United States

    8 h-index

    15 publications

    542 citations

  8. Drexel University

    Philadelphia, United States

    8 h-index

    27 publications

    1.7K citations

1–8 of 740

Venues

  1. Journal of the American Chemical Society

    JACS · 24 publications · 2.6K citations

    21

    h-index

  2. The Journal of Physical Chemistry B

    29 publications · 1.1K citations

    20

    h-index

  3. Journal of Molecular Biology

    JMB · 20 publications · 2.8K citations

    20

    h-index

  4. Journal of Computational Chemistry

    16 publications · 763 citations

    15

    h-index

  5. Proteins Structure Function and Bioinformatics

    19 publications · 5.6K citations

    15

    h-index

1–5