Concepedia

Protein Sequence Assembly

Protein Sequence Assembly is a computational method that reconstructs the complete amino acid sequence of a protein from fragmented or partial sequence data by identifying and merging overlapping regions with high fidelity.

41

Publications

3.9K

Citations

163

Authors

73

Institutions

Publications per year

2017–2026

14

Parents

Publications

41

Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and bayesian scoring functions

Kim T. Simons, Charles Kooperberg, Enoch S. Huang et al. · Journal of Molecular Biology · 1997 · 1.4K citations

, , +17

Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold

Martin Steinegger, Milot Mirdita, Johannes Söding · Nature Methods · 2019 · 487 citations · Full text

, , +16

Automated assembly of protein blocks for database searching

Steven Henikoff, Jorja G. Henikoff · Nucleic Acids Research · 1991 · 476 citations · Full text

, , +17

Automated construction and graphical presentation of protein blocks from unaligned sequences

Steven Henikoff, Jorja G. Henikoff, William J. Alford et al. · Gene · 1995 · 325 citations

, , +16

Complete De Novo Assembly of Monoclonal Antibody Sequences

Ngoc Hieu Tran, M. Ziaur Rahman, Lin He et al. · Scientific Reports · 2016 · 172 citations · Full text

, , +17

1–5 of 41

Authors

163

  1. PT
    Pierre Tufféry

    Université Paris Cité, France

    2 publications · 97 citations

    2

    h-index

  2. SH
    Steven Henikoff

    Fred Hutch Cancer Center, United States

    2 publications · 801 citations

    2

    h-index

  3. WH
    Wing Hung Wong

    Stanford University, United States

    2 publications · 52 citations

    2

    h-index

  4. MS
    Martin Steinegger

    Seoul National University, South Korea

    2 publications · 529 citations

    2

    h-index

  5. JS
    Johannes Söding

    Max Planck Institute for Biophysical Chemistry, Germany

    2 publications · 529 citations

    2

    h-index

1–5 of 163

Institutions

73

  1. Johns Hopkins University

    Baltimore, United States

    3 h-index

    4 publications

    571 citations

  2. Université Paris Cité

    Paris, France

    2 h-index

    6 publications

    232 citations

  3. Johns Hopkins Medicine

    Baltimore, United States

    2 h-index

    3 publications

    84 citations

  4. Chinese Academy of Sciences

    Beijing, China

    2 h-index

    6 publications

    77 citations

  5. Max Planck Institute for Biophysical Chemistry

    Göttingen, Germany

    2 h-index

    6 publications

    1.6K citations

  6. Howard Hughes Medical Institute

    Chevy Chase, United States

    2 h-index

    3 publications

    1.3K citations

  7. University of Toronto

    Toronto, Canada

    2 h-index

    7 publications

    135 citations

  8. University of Waterloo

    Waterloo, Canada

    2 h-index

    8 publications

    601 citations

1–8 of 73

Venues

  1. PLoS ONE

    2 publications · 33 citations

    2

    h-index

  2. Journal of the American Chemical Society

    JACS · 2 publications · 62 citations

    2

    h-index

  3. bioRxiv (Cold Spring Harbor Laboratory)

    Repository · 2 publications · 52 citations

    2

    h-index

  4. Nucleic Acids Research

    2 publications · 554 citations

    2

    h-index

  5. Scientific Reports

    2 publications · 191 citations

    2

    h-index

1–5