Concepedia

Prophage Annotation

Prophage Annotation is a computational metagenomic analysis method that identifies and characterizes integrated bacteriophage genomes within microbial host sequences by distinguishing phage-derived genetic elements from other genomic regions based on sequence features, synteny, and functional markers.

53

Publications

9.4K

Citations

367

Authors

155

Institutions

Publications per year

2017–2026

27

Parents

Publications

53

PHASTER: a better, faster version of the PHAST phage search tool

David Arndt, Jason R. Grant, Ana Marcu et al. · Nucleic Acids Research · 2016 · 3.8K citations · Full text

, , +12

PHAST: A Fast Phage Search Tool

You Zhou, Yong Liang, Karlene H. Lynch et al. · Nucleic Acids Research · 2011 · 2.1K citations · Full text

, , +17

PHASTEST: faster than PHASTER, better than PHAST

David S. Wishart, Scott Han, Sukanta Saha et al. · Nucleic Acids Research · 2023 · 589 citations · Full text

, , +11

Phage_Finder: Automated identification and classification of prophage regions in complete bacterial genome sequences

Derrick E. Fouts · Nucleic Acids Research · 2006 · 328 citations · Full text

, , +16

A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi

Timothy T. Perkins, Robert A. Kingsley, María Fookes et al. · PLoS Genetics · 2009 · 244 citations · Full text

, , +17

1–5 of 53

Authors

367

  1. DS
    David S. Wishart

    University of Alberta, Canada

    3 publications · 6.4K citations

    3

    h-index

  2. JP
    Julian Parkhill

    Wellcome Sanger Institute, United Kingdom

    3 publications · 439 citations

    3

    h-index

  3. CC
    Carlos Canchaya

    National University of Ireland, Ireland

    2 publications · 135 citations

    2

    h-index

  4. MP
    Marie‐Agnès Petit

    Microbiologie de l’alimentation au service de la santé, France

    2 publications · 182 citations

    2

    h-index

  5. DP
    Derek Pickard

    Wellcome Sanger Institute, United Kingdom

    2 publications · 363 citations

    2

    h-index

1–5 of 367

Institutions

155

  1. Centre National de la Recherche Scientifique

    Paris, France

    5 h-index

    15 publications

    445 citations

  2. AgroParisTech

    Palaiseau, France

    3 h-index

    9 publications

    1.1K citations

  3. University of Alberta

    Edmonton, Canada

    3 h-index

    20 publications

    41.5K citations

  4. Microbiologie de l’alimentation au service de la santé

    Orsay, France

    3 h-index

    10 publications

    1.2K citations

  5. APC Microbiome Institute

    Cork, Ireland

    3 h-index

    3 publications

    153 citations

  6. Wellcome Sanger Institute

    Cambridge, United Kingdom

    3 h-index

    20 publications

    4.1K citations

  7. Harvard University

    Cambridge, United States

    2 h-index

    4 publications

    94 citations

  8. Lawrence Berkeley National Laboratory

    Berkeley, United States

    2 h-index

    2 publications

    35 citations

1–8 of 155

Venues

  1. Nucleic Acids Research

    6 publications · 7.1K citations

    6

    h-index

  2. Frontiers in Microbiology

    4 publications · 83 citations

    4

    h-index

  3. Genome Announcements

    GenomeA · 3 publications · 49 citations

    3

    h-index

  4. PLoS ONE

    3 publications · 151 citations

    3

    h-index

  5. Bioinformatics

    3 publications · 474 citations

    3

    h-index

1–5