Concepedia

Pose Ranking

Pose Ranking is a computational method in protein-ligand docking that ranks predicted ligand conformations according to their likelihood of representing the true binding orientation, typically through scoring functions that estimate binding affinity or geometric complementarity.

72

Publications

16.2K

Citations

266

Authors

124

Institutions

Publications per year

2017–2026

29

Parents

Publications

72

Glide:  A New Approach for Rapid, Accurate Docking and Scoring. 1. Method and Assessment of Docking Accuracy

Richard A. Friesner, Jay L. Banks, Robert B. Murphy et al. · Journal of Medicinal Chemistry · 2004 · 9.9K citations

, , +17

Lessons Learned in Empirical Scoring with smina from the CSAR 2011 Benchmarking Exercise

David Ryan Koes, Matthew P. Baumgartner, Carlos J. Camacho · Journal of Chemical Information and Modeling · 2013 · 1.2K citations · Full text

, , +17

Evaluation of Docking Performance:  Comparative Data on Docking Algorithms

Maria Kontoyianni, Laura M. McClellan, Glenn S. Sokol · Journal of Medicinal Chemistry · 2003 · 593 citations

, , +15

Is It Reliable to Take the Molecular Docking Top Scoring Position as the Best Solution without Considering Available Structural Data?

Julio Caballero · Molecules · 2018 · 587 citations · Full text

, , +15

A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance

Emanuele Perola, W. Patrick Walters, Paul S. Charifson · Proteins Structure Function and Bioinformatics · 2004 · 448 citations

, , +17

1–5 of 72

Authors

266

  1. WP
    W. Patrick Walters

    Relay Therapeutics (United States), United States

    3 publications · 747 citations

    3

    h-index

  2. CJ
    Carlos J. Camacho

    University of Pittsburgh, United States

    3 publications · 1.3K citations

    3

    h-index

  3. TM
    Tara Mirzadegan

    Roche (United States), United States

    2 publications · 299 citations

    2

    h-index

  4. JB
    Jürgen Bajorath

    University of Bonn, Germany

    2 publications · 63 citations

    2

    h-index

  5. HY
    Huanwang Yang

    Rutgers, The State University of New Jersey, United States

    2 publications · 299 citations

    2

    h-index

1–5 of 266

Institutions

124

  1. University of California, San Francisco

    San Francisco, United States

    4 h-index

    10 publications

    649 citations

  2. Centre National de la Recherche Scientifique

    Paris, France

    4 h-index

    12 publications

    490 citations

  3. Novartis (Switzerland)

    Basel, Switzerland

    3 h-index

    5 publications

    274 citations

  4. Michigan State University

    East Lansing, United States

    3 h-index

    10 publications

    1.1K citations

  5. University of Pittsburgh

    Pittsburgh, United States

    3 h-index

    8 publications

    3.7K citations

  6. Purdue University West Lafayette

    West Lafayette, United States

    3 h-index

    10 publications

    468 citations

  7. Inserm

    Paris, France

    2 h-index

    3 publications

    145 citations

  8. Cambridge Crystallographic Data Centre

    Cambridge, United Kingdom

    2 h-index

    6 publications

    144 citations

1–8 of 124

Venues

  1. Journal of Chemical Information and Modeling

    JCIM · 24 publications · 2.5K citations

    19

    h-index

  2. Journal of Computer-Aided Molecular Design

    7 publications · 561 citations

    7

    h-index

  3. Journal of Cheminformatics

    5 publications · 256 citations

    5

    h-index

  4. Journal of Medicinal Chemistry

    4 publications · 10.6K citations

    4

    h-index

  5. Proteins Structure Function and Bioinformatics

    4 publications · 593 citations

    4

    h-index

1–5